Basic information from miRBase |
hairpin accession number: MI0003201 |
Located between position 1666324 and 1666411 on chromosome 03 strand + |
mature miRNAs for MI0003201: |
osa-miR528 (MIMAT0002884): TGGAAGGGGCATGCAGAGGAG |
References |
[1]Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X, Plant Physiol. 139:296-305(2005)., "Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GCTCGCCTTAACCTGAAGCACAATACGTATGGCAACATGTGTTTCCTGACTGTGTTGTGACGCATGTGCAGGAATCGTAA
AGGGAACCATGACCACAACTCACTCCTACACCGGCGACCAGGTCGGTCGGTTTTCTGATCAAAACGAGTAAATTGATTGA
TCGATGATCGCTGCAGCATTTCGTACGTGCAGAGGCTGATACATTCTGCGTGTGCTGTGTTTGATGATTGACTAACACAG
AGGTTGCTGGACGCGTCGCACCGTGACCTGAGGAGGGCCCGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACCGGCGC
CGCGAAGGCCGTGGCGCTGGTGCTCCCGCAGCTGAAGGGGAAGCTCAACGGCATCGCGCTGCGCGTGCCGACCCCGAACG
TGTCCGTGGTGGACCTGGTGATCAACACCGTGAAGACCGGCATCACCGCCGACGACGTGAACGCCGCGTTCCGCAAGGCC
GCGGCGGGGCCACTCAGCGGCATCCTCGACGTCTGCGACGTGCCGCTGGTGTCCGTCGACTTCCGCTGCTCCGACGTCTC
CTCCACCATCGACGCCTCGCTCACCATGGTCATGGGCGACGACATGGTCAAGGTGGTCGCCTGGTACGACAACGAGTGGG
GCTACAGGTGAGAGCAATCAGCAATGCAAACAAACAACACATGTTACTGCGTGCGTTGCAATTGCATTGCTCGGCGTCTG
ATCGATCGTGTATTCGTGTGCGGTTTTGTGCAGCCAACGCGTGGTCGATCTGGCGCATCTGGTGGCGAGCAAGTGGCCCG
GCGCGGCGGTGCAGGGCAGCGGCGACCCACTGGAGGACTTCTGCAAGGACAACCCGGAGACCGACGAGTGCAAAGTGTAC
GAAAACTAAGACCACTGTCCAAGTACGGGCTCGCGTAGGTGCAGAAATATATACTCCTATAATGTAACGAAGCACACACA
TTGACTGTCCCCGGGCAGAACTGCTATACTATATATACTGTGCTCGGATTGGCTGCCCGTACGTTGTTCCCCTTCGACAG
AGGAACGCATGACTGTCGAAGAAGAAACACAGCTGCAGACACGGGCCATTTTCTGTGAGGTGTAATACTGAACTTTGGTA
CAGACTTCAGGATTTTTTTCTTTTCGAGTCTTGTTTTACTTTCTTCTGTCTGTGTGTTTGTGCCACATGCGTCTGTTTTG
TCCGAATTCTGAAGTCTGAAGTCATGAGGTTTCGAATTTCGGCAGCCCATATCATCTCAAACTGTCATAGACCGGCCCGG
CGAAAAAAATAGCACGTGTAGCAAATCAAGCAATACAAGGATGCTGTACGTCACGTCTATCCACGGAAGGTCTATTTGCG
CGCGTCTCGGATCTTACTAATTCCGTTTCAAAATATAAAAACCTATTATTAGATACTACATATCACAATACTATAAATCT
AGACATATCTCTATCTAGACTTATAGTATTACGATGTATCTTATCCGATCATAAGCTATTATATTTTAGGACGAATGAAG
TGGTTGTTTTGTTGTCCGCATCACGCATACAGCTTCCACAGGCGGCACGGAGAGGCACCGCTTTTACCATCAGACTTGGT
CTCTGCTGGGGAAGCTTATGTCAGCCAAAATCAGATATTCTCTTATCAGTTTAATTTTTTATTCTACAAAGTTATAGTTG
TGTAATTTAAGGGCCTGTTCACTTTGATGACATTTTCAACATTACTAAATTTTGGTAAAGTTGTCAAAAAAAAAGGCTAC
ATTTAATTTGCTGTCAAAATTTGATAACTATGTAAAAAATCCTGCCAAAAATTTGACAACTATACCAAAATTTTGGCAAT
GCCAAAATTTGGTAATGTTTTTTTTTGTTATTAAAGTGAACAGGCCATAAATTAGAAGCCATAAGGTAGAAAAAAAACCC
AACTTTTTTTTTCAGATTCTCGAAAGTTTACAACCAATTAGTTATTTCTCAGAATTTTAAGCTCCTCAAATAGACCCTCG
GTGCCGTAAGTGCGAACCTGCTCTGGCTCAATCGCATAGAGGGACGCGCTGCGCACAGCCCGATGCTTTTCTATAGTTCC
ATAGTCCACCGGTTACCACATGGACGGATGGGATGATGGGAGAGTTTTCTGTAATGCTCACATTTATTGTATCTTACTAA
ACCCACTTTTATAAATACATGACAGCATTGACTTTTGAACATATATTATCTTAATTTTTAAAAAATAAATTAATTATTAT
TTATTTTGTTGTGAGTTTTTTTTATTGAAAGTACTTTAAACATGATTTATATTTTATGCATTTCGTAAAAATATTCTAAT
AAGACGAACAATGGTATGTATTAAAAAACGAGAGTATTTAACATTTTAATCTGTACTATCATTCGCGACAATTTTTTTTT
CAAAATTGCGGAGTAGTACTTCACATATTGGCATGGAGTACATCAGACGATACTAGTACAGCATACATGTCGTGGCGTTC
AACTTGTTGGAGATCTGATGCGATATAAATCGATCCTACGTCACATGACAGACTGGACCCTTGTCAAAATTATGGATTGG
ATGATTAATCACTGATAGGTAGTACTAGTAGCAACTCAATCACACAAGCGAAGTGAGAAGAAAAGGAACCTCTTCCTGCA
TTAAGACAACGGCGACGGGGTCACTGAAAGTGAAGCCTGTGGCGCACACGACACGACCTCCTCAACGGATCTGTGGCTTA
CCCGTCGCCGTTAGAGCGTTTGCTCCAACGCTTCTGCAGTACAAGAGTACAGCTGAAAGCCATAGTACACTGATGATATT
TGCAAGCCTGAAGTACAAGCCGCCCCTAACGATCTCCCCCCCATATGTACTGCAGCTAACTTGTACTACTACCAGTGCAC
CATGGCCGGGGTACAAATATGCCACCCTTCACCAATGGATGCATCAGCAGCAGCCACAGCAAAATTTGGTTTGGGATAGG
TAGGTGTTATGTTAGGTCTGGTTTTTTGGCTGTAGCAGCA