| Basic information from miRBase |
| hairpin accession number: MI0001087 |
| Located between position 9852674 and 9852775 on chromosome 5 strand + |
| mature miRNAs for MI0001087: |
| ath-miR164c (MIMAT0001017): TGGAGAAGCAGGGCACGTGCG |
| References |
| [1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
| [2]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [3]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GTTCTTAGCATCACTTTCTATTGATCTATATTTTGTATCATTTTTAAAAATGATGTTAATAAAAATAAGGGAATACATCG
GTTATCTTAATTGATGTAAATACATATTTTTGTATCCATTTTCCGAAGTGATGAAAACTAATACAAATTTGTATCAATTT
GATTAAACTGACACTAAACAAACTAATTAACAAATCACTTATTAGAACTGATGTTGAATTATTTATTTTGTGTCATTTAC
TTATAAGTAATTTAAACTAGTATCATTTATACTTCTGATTCTAATTAATTGATGTAATCCATCACTTTTTTTGTAGTTAA
CCGAAACGAATTTTTTTGGTACCTATAAAAATCATAAACTCTAGAAACAAAAGAAACACCCAAACAAAATGAGACCGAAG
CGGAACCGATCATTCCTAATTTTCAATTTTCATCACAATACTTACGAATATAGGAATATTGAAATGGCGTCATAATGTGT
GAGTAAAAAAGAAAATGTATGGTAAAAATATCGAAACGAGAGAGAGAGTGTTAAAAGCAACGACGTCAGAGGGGAAATCC
AAACCCATAAAACATGGGGGAACGATTCACTTCCACTTCGTCAGAACTAAGTGACAGTGAACTTCACTTTTTTTTTTTTT
TCTTAAAATGAAATCTCTTTTACTAATACATCTTTTCTATTACTTTGTGCGACACTTTCTTTTTCACATATCATGAAAAA
TCTATCATCTAAGATTCGATGCTCATACTTTTAAACATGTAACAATCAAACTTGAATTTACCAATTACCAACGTAAAACA
TGATTTTTCTTTACTGAAATTTACTTTAACAATAATTTGCATTGCTTTCATTTTAAGCAACGAATAAAGATAATTATAGC
TATATTCAAATTAGTATAAGTATACAAACTCATAGCACATTTTTATTGATATAACAATGGTCCATATAGATATATAATTG
TTACCCATGTCGACCAATGGGAATTATCCTATCATAACTGCTAACTTTTAAATTAAAAAAGAAGTTATATATTATTGCGT
CACATTGACTATATAGTCTACAAATATATGAATGTTATAAGATACATAGATCACAAAGATTTGTTTTAGTAACAAATGGG
CAAAAAGGGGAATAATAAATGATTAAACAGAGAGAAGAATTGCATCGGAACTCTGCAATACACAAAGTCTCTGTCTCTCT
ATCTTTGGTGATGAGATCTTTTTTTTTTTTTTCTCTTCTGAGGGTAAAAAAAAAAAAGAGAGAGAGGAAGAAACTCGCGA
GGAACACGCAACCCATTCCTTTCTGTGTCACTGTCTCCATCAACTCATCATCATCTTTCATTTCTCTTCACCATTCTTCT
TCTTTTTTCTTTTCTAAAACACTTTCTATTTCATTTCTTACCCTTTCAAAATCAAATAATGCGGTTTTGTATTTGAGGAA
GTAAAAAAAATACATAAGTACATATGTTTATAAACTTTGCTAAACATAATAAATCATTTGGGAGGTTTAGTGCCTAACCT
AATAATCGGATGGAGATTAGTCGGTATATTCTTTCCGTATAATTGTGTTTTTATATTAAATTGATGTAAGAATTATAAAT
ACATTTTAGACGTAATATTTAGTATTTTCAGTTTAAGTGTAATTTTCTATATTATACCACACATATATATTTATTTATAT
AAGTATTATGCATATATTTCAACAATTCATATGTAAAAGCGGATTTTAAAATAAAAATAAAAATCCGGATATGAAGATGA
AAACTTTGAATAACTTGCTTTATGAATCGGATCGTATTTTTGATCATGAATATTTTCCTCACCATGTAGATAAAATAACC
AAATTACCGATTTGTTTTCGAAGATAACTGTCCGGACTGATTTGTTGTGAAGATAATTGTTCGGAACAATCAATTAAAAC
AATTTGAGTTCTGTTGGTACCACATTTTAACGCTTCTTATTTTGGTGACCTAGAAACAAACGTTCACATAATGGAATTTC
CAATATCTATGATAAACAAATGATTGTAAATATGCACGGAAACGTTCTTAAGCACTACTTGGTTGATAAAATATGTTTGA
TGTTCTTTTTAGCGCATTTACATATACGCATGGTGACATCACAATGAGGTAAAAAGTTGGGATAAAATAGTGAGACTTGA
ACTTGGATTCGGCGGCAGGAAGTAGACATAAACTGACCCAAACTCATCACCTATCTTTACTGTCTGTCTCTATTACATAC
ATTGCGTAGTAAACTGTTTCATTATTTATATGGAATGTTTTATTAAAATATTATAACTACTCTTACAAGCTACCCAATTG
TAAATTAATAATCTGATCCTTCTGTCATGTTCAAAGGTCAATTTTGTTTCTTTATGCATAAACAATTTTTAATTATCTAC
CAACAAATAATTAGTTGGTCTATTTCACTATTTCTATAACCCAATTACGTCGTGAGGGTTGGAATTATTGAGAAATATAT
AAATTATTTCATTAACTGCAAGGTCTAGCTATGTACACATGCGTCTTGTATCTACTACATCTCCAAAAAATATTTGTTTT
AAAAAAGAGAATCATTTAAAGTAATGGAAAGACTTGGTGATATGATTGCCATTTTACTTCTTATCTACATTTAAAGAAAT
CCCACTTCAAGACTCAATCACTTTAATACCACTCCCATCTATCTTCAAGCTAATACTTTTTGTATTTTCGTGATTTTATT
TTAAATACTAAGATTTTTGCCTCATTTTATCAAACACTTGAAACCCACACTATATATGTACGTGAATGAGCAAGCAGAAG
TTATTGCCTCCTCACTCTCTAACTTGAATATTTTATTCTTAATTCTCTTCTTCCTCTCTACACACCCAAATCTCTTCTCC
CTCACTCTCTGTCTCTCTATGTATAAAATATAATATGTGTGTGTAAGTAGCTACATATACGTGGCCATGGAGATTATTTG
GAGTTTGATGATGCAAGAGAGAAAGTAATGGGTGAGTAAC