Basic information from miRBase |
hairpin accession number: MI0001052 |
Located between position 14597624 and 14597711 on chromosome 07 strand - |
mature miRNAs for MI0001052: |
osa-miR398b (MIMAT0000983): TGTGTTCTCAGGTCGCCCCTG |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CCAGCGACCCCCACGGACTTCTCGCCGCTTCACAGTCTGGCACACTATAATGAACCATGCTATACAAAAGGTAAAGCCGT
TGCCCATGCTGGCTTGTGGTTGGCACGGTAAATGTTTCACAACAGTAGCTCGCGAACCGGTCCTTAATTACCATGAGCAC
AACCATCAAAACCATATGCTCACAACCCACCTTAACCAGGTTTTAATTATCATCGTGAGCTACCATTAAATATAACCATA
ATTAATAAGAATAATATAATATAATTTATATTTAATCCCCTTTAATTAGCTAATGTTTCTAAGCATGGCTAAGCAAACAT
ACATATAGCATTTAGCTGAACCAAACCAATATATAAGGTTCATGCTAATCAAATTATAACCCATAGGAAAATAAGATCAT
CTTCGGCCATTAATTAACGGGGAAAGGCTCACCACCCGATGACATTAAAAAATAATGCATAGTTGAAATAAAATAATAGC
TTTAAACGGGTTCAACATGCTCAAAGGGTTATTTGGGATCTGTGTGACTTGCCTTGAGCTTCCGCAAACACTTCCGAACC
TTGCTCAACGAAAACGCTCTCCTCCGGAACGTCGGAAACTAAAGCGAAAGAATAAAAATCAACAAAACAGTAAAAAACAA
GCATAAACAGTACATGTGAATATTTTTAACATGTAGATCTTGATTTTAGAAAAATTTAGCAACTTGAACCACTCGAATCG
AATCTACAGTTATTTAGTTATGATTTTCAGAAGATTTAATCTATTAGAAAAACGGGAAAAAGAAAAACCGATGATGTCAT
GATGACATCATCAATGGCGGCCGAACCAAGATGACGACCTCGCCGGAGATAGAGCGACCGGCTGCGGATTTGGAGGACAT
GAACACATAGAGGACGACGAGATGAACCCAACGGTACTCACCCTCGAACCAAACGACGAACGACGACGGCCGGCGACGAG
ATGAACGGCGGCGGCGGCTCGGACCTCGCCGGAGATGGAGCTCCGGTGGCCGGCGACGAAAGGGGACGGGCGGCCGGGCT
TCCCCTCACCACGGCGCACCTAAACGCGGCAGCGGCAAGCGGCGACGACGACGGAGACGGCTGCGCTACCTCGCCGGAGA
TGGCCGGCGGCAACCGGTGAGCTAGGCGGTGGTGGCGGCGAGGCTACGGGACACGGGAGACCACGGGAGAGGGGGCAAAC
GAAAGAGGAGGACTAGGGGCTCCTATTTATAGCCTTGGATTGAAGAGATCGGACTCCTCCCGCAAGAAATCGATCCGGGA
AATCAAAAACTCGGTTTTGGAGATAAACTCAAAAACGAGTTCGATTCGGATAAGATACTCAACGAAATGCTCCTATTCTT
GAGGGGAAAGGTAGAGGAGAACGAGAGGATAAAAACCCCTCAAACAATCGGAAGAAAAGGGGAGAGATTGGGGAGGAAAC
GGCGCGGCAAGGCGACTCGGCAAGGCGGCTCGGCTCAGCTACAGCCGGCGGCTGGAGCTGGAAGATGAACAGTAGCGCGG
GGGAAGGATAATAGACTTCTTGCCGGGCTTTTCTTTTCTCAGCCTGATTAGAAGAGGGAGCAAAACCGGACTTTGGCTGA
GAGAAGAAGAGAGGATGAAGGCTCGGGTTGGGCCGGCGGAAGAGAGAGGAAGGAAAGGAAGGAATGGGCCAAAAATGGCC
CAAGCTGAGGAGGAGGATTTTTATTTACTTTTTCCAATTAAATTAATCAATGAAATGATCTTTGAATTGTTAAAAATACT
TCCGATGCTCAAATAATTCCAAGAAAAATCTTGAAAATACTTGCACACTCAAAGTACTTAACAAAATTATAATTAGACCA
TTTAATGATTAATTTAATATGTGGGTAATTACTGAAATGCTCTTTGTATGATTAAAATTAGGAATTGAGCTCTGAAAAAT
CCGAGAATATTCCAGAGAGTATAATTAACCATGGAGAATTTAAAAAAAAAATTAAATCCATCCATGCTTTATATTTAGGA
AATTTTATTTCCCACATTTAACTTCACTTGTAAATTAATGAACATTTAATATAAATTCTAATAATAATTTATTAAATAAT
TTATAAATCCTGAAACAAAAATCAGGATGTGACACATAGTTTCCAACCCATCCTAGCCATAGACAAGGGTACCGACCCAA
CCCCACCTACGGCCGGAACCTCCAGGACAGGTAGGCAGGACTGAGCCCCTAGCAGCAGGACACCAGCCTTGTGACATGAC
ATTTCGACTACCGGGCCGCAGCTCGTGTAGCCTTCATTTGTCCTAGAGATGTCCATCGACCCTCGACTTCGTCCATCTCC
ATCCATGTACCTTTGTTTATAACCAGACTGAGCCACAAACTAAGCCTTACCCACTAGACATGTGGAAGTACGGTAGTGCT
TTGCAACAGAGGCCCGAAGACCGGTCCTTATGTGGCCAAGGTGCTACTATCAAAACCATGCACCCTGAGCCCAGCCTAAA
ACCATTTTGAGGGTTTTGAATAGAGGGGGAGGTGTGCGTCCATTTCTACAATAATCCAACCATTCCATAATGTCCAAGTG
ATATGAGTATTCCCAAAGTCGAGAGTTATAAAACCACCTAATGTTGCCTAACTAATCAGCGAAGCATCTACCTAAATTCA
TACTAGTGGAACCATGAATAGAGTACCCACTAGTTGGGGTTTTGTTTATTCTAGGGTGAACAAGGTTATAATAACAATAG
CAATAATAATAAGGTCATAACAAAGGTAAATAGGCATGGCTAAATAAAACAGTGATAACGCGGGAATTTAAATAAAGCGA
TAATGCATTAATTTAAATCAAAATAATTTTATAAACTGGGATTCAATATGCTCAAGGATGATGTGACTTGCCTTGCTCAG
AGAGAACGGCCTGCTGAACCTTCGGCGACGACCGCGAACCACGCTTCGAGAACCTCCGGAACGACAGAAGCTACGCGAAG
CACACAAGCAAAGCTAAACCCTATAAAGAAGTAATAACAA