miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0007231
Located between position 7562374 and 7562511 on chromosome Gm09 strand +
mature miRNAs for MI0007231:
         gma-miR1518 (MIMAT0007377): TGTGTTGTAAAGTGAATATCA

References
[1]Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O, BMC Genomics. 9:160(2008)., "Novel and nodulation-regulated microRNAs in soybean roots"




>promoter (3kb upstream pre-miRNA, by PMRD):
TTTTTTTTATTTTGTAGTTGTATTTTGAGGTGTTAGTCCATGGAACTGGTGCACGAAATATTTTTTTTTGGATTCTTTAA
CGTTCAAACTATAGAAAAAATGAGTCACAAATATCATTAATGTGTTCGACATAATTTTAAAAAAATGCAGAACATGGACT
CTTAGGCATAGTTGCAAGGGTCCAAATCATAGTTTTTTTTATTTTGTACTTGTATTTTGCGGTGTTAGTCCATGGAACTG
GTGCACGAAATAATTTTTTTTTGGATTCTTTGACGTTCAAACTATAGAAAAAATGAATCACAAATATCATTCATGTGTTC
GACATAATTTTAAAAAAATGCAAAACATGGACTCTTAAGCATAGTTGCAAGGGTCCAAATCATAGTTTTTTGATTTTGTA
CTTGTATTTTGAGGTGTTAGTCCATGGAACTGGTACACGAAATAATTTTTTTTTTATTCTTTGACGTTCAAACTATAGAA
AAAATGAGTCACAAATATCATTAATGTGCTCGACATAATTTTGTAACTCTCACACCATTTCCACTCATATCCCATAAGCA
CCACCATGGCTCCACCTAAAGAAATTCCGACCCTCATTTACCACAATGCTCACATTCTAGACGATCCAGTTCAAGGATCG
ACGTACCAATGTACAACCCCAATATTTTTTTACGCCAGTCGTTCTATTACGTTTACACAATTCATTCGAAAATTTAACAA
TTGTCTCCCTACTCGAGCAACTGAACAAGTTGCTCAATTGTTATTTCGTGTCCCTATTTCACTTCATCTCGGTCAGACAC
GTTTTATTTCAGGTCAACTATTCGACAATGATGATCTTAGAGGCGCGATGGAAACAATTATCCAGAATCCACAACTGAAT
TTTGCCGAATTCTATGTTGTTACTGAGCTTATTCCTCAACCACAACCATCGTCTCTATAACCCTCATGTCCACAACTACA
ATTACCGCCTCCACAACAGTTACCGTACAACAACATAGACCTCAATAATCCAGTATCTTCATACAACAACCTTGAATCAC
AAGACCCCTTTGACATTTATACTTCATACACACAAATATTATCCGAGAACGATTCCTTTTTTCATGGCCAACAAACCTCC
TTTGACCAACAAAACCATCCTTCATCCCCCTTTACCCCACCTTCACAGCTACCACAAACGCAAACATCAAACCGAGATGA
ACATCTCATTGCTAACGAAGATCCCATTATATGATTTCATCATGAAAACATGGATGATTTTACTGAGGATGAGAATCAAC
AGTTCTTTGATCACATCAATCACCAAAGCGATGACCAAAGTGATGATCAAATCGATGACGAGGGTGTTGGCAGACCAACG
ACACCTCCGTCACCTCCGTTGCAATATCAGCAACCTAGGTGTCCAGTAGACTTGAACTTTGACCACCTACCACACTACAT
TGATCGACACCATTTTATTCATTAGCAACACAATGTACAACCACCAGTCAGTATACTCGAGGTTGGCATGACCTTCGATG
ACAAAGCACAATGTATTCGAGCAATCAAAGAATATAACATCAGAAATCATTTTGATTGCAGAACAATTTACTCTGACTAG
AGAAGGCTAAACTTCGTTTGCAAGTTACATGAAAATGGTTGTACATGGAGCTTGAGCGCATGCAATTCAAAGAGGCATAA
CAAATGGATTATCAAGAGTATTAGAGGTCATCACACTTGTCTTGTGCCGATGCTCAGAAAAGATCATCGCCAACTCAACA
AACACGTCATAGCACAGATCATCCAACCAATTGTTAAGACAAACCCAACTGTCTCCATCAAGATGTTGATTGCAGAGATC
AAAACGTTCATGAATTATACCCCATCCTACAAGAAGACATGGTTAGAAAAGCAAAAAGCATTGGAGATGATTCATGGAAA
CTGGGAAGAATCATATGCCAAACTGCCAAAACTTTTCGGAACTTTGCAATCTTGTGTACCTGGGACTGTGGTCGCTGCTC
AAACAGAATCCTTGCATGAGGGGGGAGAAATAGTATCGGGCAAAAGATTGTTTAAATGTGTCTTTTGGTCATTTGATCCA
TGCATTAATGGTTTTGCATATTGCAAGCCCATAGTACAAGTAGATGGTACATGACTTTACAGAAAGTATACTGGCACACT
GTTGATAGCTACCGCACAAGATGAAGTTAACCATATCTTTCCGATTGCCTATGCCATTGTAGAAGGGGAGACAACTTCAG
CTTGGGGTTTTTTCTAAAGAATTTGAGAAGACATGTTACTCCGCAAATTAACATTTCTCTTATTTCAGACCGACACCCCT
CAATTATAAGTGCCTACAATAACCCAAAGTAACTTATGGGTTGAGGACACATCCCATTTCTTTTGCCTGCGCCACATTGC
ACAAAACTTTCTTCGCGGTAACTCAAACTGCAAACATTTAAAGAAACCACTTATGTTGGCTGGTGAGAATCTATTTTATT
TATTCGTTATAATTTTCTTTCAATCAAATTTTATAACATAATACATTGAGTAAATATTTACAGGGTACGCATACATGGAG
AAGATGCACTGGCGACATCTTGGGGATATTCGTGCGAATAAGCCAAGTGCAGCTGAATGGCTTGATCAATTACCCAAATA
AAAATGGGTACAATGCTTTGATGAGGGGAAACGTTGGGGACATATGACTACCAATTTGTCGGAGTTTGTTAATTCCATGT
TCAAAAACACAAGACATTTGTCGGTGTCATCGTTGGTTGAGGAGACCTATTTCAAGACCGCACAACTCTTTGCTAATAGA
GGTCGACAAACTCAGGCAATGATCAACTCCGGCTCACACTATTCTGAAGTCGTCTTCGATGTAATGAATAGTGGTCAACA
AGAATCTAATACACACATTGCAAATGAATTCGATAGACACAATCACACTTTTATTATAATAGAGACTCAATCCCCACTTG
AAACACCCAGACCACCTGGAAGGTTTAGAGTAACATTACA