Basic information from miRBase |
hairpin accession number: MI0007231 |
Located between position 7562374 and 7562511 on chromosome Gm09 strand + |
mature miRNAs for MI0007231: |
gma-miR1518 (MIMAT0007377): TGTGTTGTAAAGTGAATATCA |
References |
[1]Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O, BMC Genomics. 9:160(2008)., "Novel and nodulation-regulated microRNAs in soybean roots" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TTTTTTTTATTTTGTAGTTGTATTTTGAGGTGTTAGTCCATGGAACTGGTGCACGAAATATTTTTTTTTGGATTCTTTAA
CGTTCAAACTATAGAAAAAATGAGTCACAAATATCATTAATGTGTTCGACATAATTTTAAAAAAATGCAGAACATGGACT
CTTAGGCATAGTTGCAAGGGTCCAAATCATAGTTTTTTTTATTTTGTACTTGTATTTTGCGGTGTTAGTCCATGGAACTG
GTGCACGAAATAATTTTTTTTTGGATTCTTTGACGTTCAAACTATAGAAAAAATGAATCACAAATATCATTCATGTGTTC
GACATAATTTTAAAAAAATGCAAAACATGGACTCTTAAGCATAGTTGCAAGGGTCCAAATCATAGTTTTTTGATTTTGTA
CTTGTATTTTGAGGTGTTAGTCCATGGAACTGGTACACGAAATAATTTTTTTTTTATTCTTTGACGTTCAAACTATAGAA
AAAATGAGTCACAAATATCATTAATGTGCTCGACATAATTTTGTAACTCTCACACCATTTCCACTCATATCCCATAAGCA
CCACCATGGCTCCACCTAAAGAAATTCCGACCCTCATTTACCACAATGCTCACATTCTAGACGATCCAGTTCAAGGATCG
ACGTACCAATGTACAACCCCAATATTTTTTTACGCCAGTCGTTCTATTACGTTTACACAATTCATTCGAAAATTTAACAA
TTGTCTCCCTACTCGAGCAACTGAACAAGTTGCTCAATTGTTATTTCGTGTCCCTATTTCACTTCATCTCGGTCAGACAC
GTTTTATTTCAGGTCAACTATTCGACAATGATGATCTTAGAGGCGCGATGGAAACAATTATCCAGAATCCACAACTGAAT
TTTGCCGAATTCTATGTTGTTACTGAGCTTATTCCTCAACCACAACCATCGTCTCTATAACCCTCATGTCCACAACTACA
ATTACCGCCTCCACAACAGTTACCGTACAACAACATAGACCTCAATAATCCAGTATCTTCATACAACAACCTTGAATCAC
AAGACCCCTTTGACATTTATACTTCATACACACAAATATTATCCGAGAACGATTCCTTTTTTCATGGCCAACAAACCTCC
TTTGACCAACAAAACCATCCTTCATCCCCCTTTACCCCACCTTCACAGCTACCACAAACGCAAACATCAAACCGAGATGA
ACATCTCATTGCTAACGAAGATCCCATTATATGATTTCATCATGAAAACATGGATGATTTTACTGAGGATGAGAATCAAC
AGTTCTTTGATCACATCAATCACCAAAGCGATGACCAAAGTGATGATCAAATCGATGACGAGGGTGTTGGCAGACCAACG
ACACCTCCGTCACCTCCGTTGCAATATCAGCAACCTAGGTGTCCAGTAGACTTGAACTTTGACCACCTACCACACTACAT
TGATCGACACCATTTTATTCATTAGCAACACAATGTACAACCACCAGTCAGTATACTCGAGGTTGGCATGACCTTCGATG
ACAAAGCACAATGTATTCGAGCAATCAAAGAATATAACATCAGAAATCATTTTGATTGCAGAACAATTTACTCTGACTAG
AGAAGGCTAAACTTCGTTTGCAAGTTACATGAAAATGGTTGTACATGGAGCTTGAGCGCATGCAATTCAAAGAGGCATAA
CAAATGGATTATCAAGAGTATTAGAGGTCATCACACTTGTCTTGTGCCGATGCTCAGAAAAGATCATCGCCAACTCAACA
AACACGTCATAGCACAGATCATCCAACCAATTGTTAAGACAAACCCAACTGTCTCCATCAAGATGTTGATTGCAGAGATC
AAAACGTTCATGAATTATACCCCATCCTACAAGAAGACATGGTTAGAAAAGCAAAAAGCATTGGAGATGATTCATGGAAA
CTGGGAAGAATCATATGCCAAACTGCCAAAACTTTTCGGAACTTTGCAATCTTGTGTACCTGGGACTGTGGTCGCTGCTC
AAACAGAATCCTTGCATGAGGGGGGAGAAATAGTATCGGGCAAAAGATTGTTTAAATGTGTCTTTTGGTCATTTGATCCA
TGCATTAATGGTTTTGCATATTGCAAGCCCATAGTACAAGTAGATGGTACATGACTTTACAGAAAGTATACTGGCACACT
GTTGATAGCTACCGCACAAGATGAAGTTAACCATATCTTTCCGATTGCCTATGCCATTGTAGAAGGGGAGACAACTTCAG
CTTGGGGTTTTTTCTAAAGAATTTGAGAAGACATGTTACTCCGCAAATTAACATTTCTCTTATTTCAGACCGACACCCCT
CAATTATAAGTGCCTACAATAACCCAAAGTAACTTATGGGTTGAGGACACATCCCATTTCTTTTGCCTGCGCCACATTGC
ACAAAACTTTCTTCGCGGTAACTCAAACTGCAAACATTTAAAGAAACCACTTATGTTGGCTGGTGAGAATCTATTTTATT
TATTCGTTATAATTTTCTTTCAATCAAATTTTATAACATAATACATTGAGTAAATATTTACAGGGTACGCATACATGGAG
AAGATGCACTGGCGACATCTTGGGGATATTCGTGCGAATAAGCCAAGTGCAGCTGAATGGCTTGATCAATTACCCAAATA
AAAATGGGTACAATGCTTTGATGAGGGGAAACGTTGGGGACATATGACTACCAATTTGTCGGAGTTTGTTAATTCCATGT
TCAAAAACACAAGACATTTGTCGGTGTCATCGTTGGTTGAGGAGACCTATTTCAAGACCGCACAACTCTTTGCTAATAGA
GGTCGACAAACTCAGGCAATGATCAACTCCGGCTCACACTATTCTGAAGTCGTCTTCGATGTAATGAATAGTGGTCAACA
AGAATCTAATACACACATTGCAAATGAATTCGATAGACACAATCACACTTTTATTATAATAGAGACTCAATCCCCACTTG
AAACACCCAGACCACCTGGAAGGTTTAGAGTAACATTACA