| Basic information from miRBase |
| hairpin accession number: MI0001072 |
| Located between position 19415052 and 19415186 on chromosome 2 strand + |
| mature miRNAs for MI0001072: |
| ath-miR403 (MIMAT0001004): TTAGATTCACGCACAAACTCG |
| You can find this miRNA in ASRP: miR403 (accession: ASRP359) |
| References |
| [1]Sunkar R, Zhu JK, Plant Cell. 16:2001-2019(2004)., "Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis" |
| [2]Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC, Plant Physiol. 138:2145-2154(2005)., "Expression of Arabidopsis MIRNA genes" |
| [3]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [4]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [5]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CGCTAAACGATTCACTATGACTAAGCTTTGGGGTTTTCACCTTCCTCTTGGTTTACACGGAAGGTAAATTTCAAATTTGC
AGTGTTTTTGATTCTGATAGGTTACAAAAAAGTTAAGAGTCTTTTGAAATCTTAAGGTTGTTTTTGTCATGGTTCTAGAG
GAAGGGGATCTAGGGATGTCTTGAAGCAGTCTCGGCAAGGTGTTCTTGTTCATGATGCAAGCTATCACATTGCTGTGCAA
TTGGAGGGTCCAGAGGCAGGCATTCACACTTATTCTTGATATCCTTCTATAAGTTTTTTTCAACTTGGTTGTGTGTTCAT
ATTTTCTTCATGTCTTTTGGCTTTGAATTTCTCAGGGCTCACTCTTATCGATATTAAATATGCTACTAGAGCCTTCTCCG
TCATCTCATTCGAAGGAAGTTTTCGACTCTATTCTCACTGGCGGTAGTTATGAAAACGCCATGGTATAGTGAATTTATGA
ATTCATTTAATAGGAATCAAGACGATAACTTTAGAATGATGTAACCGCAAGTTGTTTGTTTTCTTCAGCTTTATCATGTC
GAACCACCAGTTTCTCAGGCGATTGCTCCTGTTACTTATATGTGGAGACCTTCTAAGATACCAAAGAGAAGAAATGAGGA
GAAAGGGGGTGACGGCATAGGAACTGATCTCCCAGTCTCAGATAAAGATCATGAAGACTTTCGTAAACTTTGGGTGTGGA
TCCATGCTTCTTCCTTCAGTGAAGGATATGCTATTCTTAAAGTAGCTTGTCAGAAACAGGTAGCTATTTGTTGTCTTTTG
AGGTTATTTTTGTGACGTTTGTTGTTAGCTATATGCTTTACATATTCTTGTGGAGATAATGACACCTCAAGTTCCTTCAT
TCAGATGAATGAGACAGGTGTCTCAGTTGATTGCTTTTCACTCGAGGGTCAGCTTGCAAAACTTGAGATTTTTGGTTCAA
AAGCATCTCATCTTCTCCAGAAGACCTTACATCCTGCTACAAGGTGAGCCATCTGAGTAAATATAGAATGATTTTCAAGA
ACGCAAATGAACAAAGGAAAATTTATCTCAGGTTTTTTTTTTTTTTTTGGTCTTTGCAGTACCTCTGAGAATCCCTCTAT
TCTAAGAAAGTGTTCAATGGAAAAAGCTGAGGTTAAAAACGTTGCTGATCTTTACACAGAAGAGAACGTATCATCTGGCG
CTATTTTAGCACAGTTTGTCATAGATCCGCGGTTGATCCTGACTAGCCCACATGATGATAGGACAGTGTCAGTTGAAACG
ATCAAAACTGAGCCTACTGAGTCCGTTGAAACAACAACCAACACTGAGGCTGAAACTTTTCCTGAAGTTTTCAACTGCTT
GTGGGATGCAAATAGTGAGCTGACCCCTCCCGAAGAAGAGAACATGTTGTGTTGGGAAAAGCATCAAAGTCGTATGGATT
CTCTTTGCCTCGATGACCCAGCTGCTGAGGTTCCAAAGGTATCTAGTAGGCCAAGGAGTTCAAGGTCCTGTCCTTTACTG
CTTCTTAAACATAAAAAACTTGGGAATGCGCCTACTGGGTAATATGTACTTTGATTGAATCGTTCTGTGACGTTCTTTAG
ATTAATGATCCAAAAGTAATCATTGTTATTTTCTTTCAGATGGTCTCTTATTCTTCCCCTTAGTTGGATCAAAGTCTTCT
GGAATGCCTTCGTCTCAAAAGGAGCTCATGCAATAGGTCAGAGGGAGAAACGCTGGGTTTCATGTGATGTATATTTTCGC
TCTCCTAAACTTTATTCTCTGAATGTTAAGATTCTCTTGCTATGTAAACTTGTTAAATCTTATATTTGAAAACTGTCTGA
AACTTGTCATTTTCTTTATTTGCAGGATGGTTTACCCTTTTTCCCATCAGATTTTCCCGACTGTAAAGCGTATTCATCTT
TTACACTGAGCGAGGCTGCAGACTTGGAAGAAAAGGCACAACGTCGCCCTCCAGCCATAAGACCTTTCAGAATTCCCATT
CCACCTCCATGGAATAGTATCCATGTCACCCGTTCTATTGGAGAGGGTTCCAATCAAAAGTTTTCAAGCAATGGGAGGAG
TGTTGTGGAAATTTCCAGTTATGGTGGTAATCTGTTTGATGGTATCGTGGCAAGAACATCAGATTCGCTAACTACTTTTC
TCCAAACATTCACAAGTGACAACATGCTTTTATTTCCTCACAACACTTCAAAACCAAGCACAGACCTTATGATGACGCTT
CAAGAAGATGATAAAAAAGTAAGAGCTCAGATCCATCAGAGTAGTAACAAACTGTGCCTCGTCAGAGTTCTTCTACATGC
TTTCAAGGAAGGTTCTTTCGAAGAAGGCGCGGTTGTATGTGCACCAACTCTTGCAGACATATCATTGCTAAAATCCAGGT
AACATCTCCAAGAATCCATGTTCAACAAATTGTGATCCATTGGAACTATTTCATTTTGGTATCACATTCTTATACATTAT
GTTTTACAGCTGCAGTGAAGGAGAAGATGGGCGTGTCACAATCCCACAATCTTCTGTAAGTTCTTACTTTCAAGAACAAC
CTTGTGGAACCTGGGAACTAAATGTTCCTGAAGACACTCTTACAGAGCAATCTCATAGATGGCCAATCGGGTTTGTAACA
ACAGGATTTGTACGTGGGAGGTAAAAACTAAAAAAAACCACTAAATATTGAGTACAGGTCGCCAGAGGCTGATTTGGTTT
CTGAGCTCTTAAACCTGTCTTTATTGTGTGTAGTAAAAAGCCGGCGGCCGAAGCTTTCTGTGATGCGGTGTTGTTAGGGA
GACTAAGAGATGAGCAATGGAGAGACAAAGATGTAAGACGGAGGAAGAAGCAGATTTATGTTTTAGTTAGAAACCTAAGA
TCTTCTGCTTTTAGACTCGCACTTGCTACGATTGTCTTGGAGCAACAAGACTATTGTGATGTCCACTGCTTTTAAAATGC
ATTTTTTAAAATTCAAATTGTTTTTTTTTTGTATCAATTA