miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000782

Located between position 73507121 and 73507192 on chromosome X strand -

Overlapping with sense strand of NCRNA00182-004 (intron 1).

(Ensemble: OTTHUMT00000057258)

mature miRNAs for MI0000782:

hsa-miR-374a (MIMAT0000727): TTATAATACAACCTGATAAGTG

hsa-miR-374a* (MIMAT0004688): CTTATCAGATTGTATTGTAATT

You can find this miRNA in TARGETS:PICTAR-VERT: hsa-miR-374 (accession: hsa-miR-374)

References

[1]Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS, Dev Biol. 270:488-498(2004)., "Human embryonic stem cells express a unique set of microRNAs"

[2]Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M, BMC Bioinformatics. 6:267(2005)., "Identification of clustered microRNAs using an ab initio prediction method"

[3]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

[4]Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"

PROMOTER INFORMATION

PROMOTER ID

LOCALIZATION

SEQUENCE

REFERENCE

SNP

TFBS

451

chrX, 73426274-73430935, -

promoter sequence

Marson et al.

815

chrX, 73423846-73428917, -

promoter sequence

UCSC

more data

Expression data from PhenomiR