miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000440

Located between position 97847727 and 97847823 on chromosome 9 strand +

Overlapping with sense strand of C9orf3-016 (intron 6).

(Ensemble: OTTHUMT00000053211)

mature miRNAs for MI0000440:

hsa-miR-27b* (MIMAT0004588): AGAGCTTAGCTGATTGGTGAAC

hsa-miR-27b (MIMAT0000419): TTCACAGTGGCTAAGTTCTGC

You can find this miRNA in TARGETS:PICTAR-VERT: hsa-miR-27b (accession: hsa-miR-27b)

References

[1]Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T, Curr Biol. 12:735-739(2002)., "Identification of tissue-specific microRNAs from mouse"

[2]Michael MZ, O' Connor SM, van Holst Pellekaan NG, Young GP, James RJ, Mol Cancer Res. 1:882-891(2003)., "Reduced accumulation of specific microRNAs in colorectal neoplasia"

[3]Dostie J, Mourelatos Z, Yang M, Sharma A, Dreyfuss G, RNA. 9:180-186(2003)., "Numerous microRNPs in neuronal cells containing novel microRNAs"

[4]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

[5]Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"

PROMOTER INFORMATION

PROMOTER ID

LOCALIZATION

SEQUENCE

REFERENCE

SNP

TFBS

510

chr9, 96857925-96859033, +

promoter sequence

Fujita et al.