| Basic information from miRBase |
| hairpin accession number: MI0001071 |
| Located between position 29016520 and 29016828 on chromosome 1 strand + |
| mature miRNAs for MI0001071: |
| ath-miR402 (MIMAT0001003): TTCGAGGCCTATTAAACCTCTG |
| You can find this miRNA in ASRP: miR402 (accession: ASRP1730) |
| References |
| [1]Sunkar R, Zhu JK, Plant Cell. 16:2001-2019(2004)., "Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis" |
| [2]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GAAGACGATCTCTCCCACAGTTGCTCCATCATGCTTCACGCTCTTCCCGGATATTGGGTCTCTAACATCGACTTCCGCGA
ATACTGCAGTTCTAATTCCTTGCCTTGATTTCTGTTTTGCTCTCTCGTCTGGTTCTAGACGATCCCACTCAGGCTTCAAT
GCGCACGAGACAACCAGACCGCCTGTTTCTGTCATCCCGTAACCGTGACTCACGTCGAAACCAAGCGCCTCAGCCTTGGA
GATGACTGTAGCTGGTGGTGGAGCTCCAGCAGTCATAACCTTAACTGGGCTCTGAAGCGGTTTCTGGGCTGGGTGATTAG
TCAACATGTTGAGAACCATTGGCGCAGCGCACATGTGGGTCACTTGATACTTGTCGATCAAGTTGAAAATAGTCGGCACA
TCAACTCTTGTGACACAGATGTTTCTGGCTCCCACAGCTGCTGTGGCCCATGTGTAGCTCCAACCATTGGCATGGAACAT
CGGCAGTGTCCACAGGTATACCGGACGGTTAGGCAAAGACCAGTCTAGCAAAGAGTTAATAGTGCTCATGAAAACCGATC
TGTGGCTATGCACCACTCCCTTTGGGGACGACGTAGTTCCTGAGGTGTAGTTAAGCACCATTGGAGTCCACTCGCTTTTA
GGACGTACCCACTTGAACCTCAGGTCTCCTCTCTCCATAAACCCTTCGTACGTGTCAAGAAAATCCATATCAGCTGATGA
AGATGATGGCATGTCGTTTCCGTCGTTGAGTATGACGAGACGAGGTCTCTCATCCTTGGGCAAAAACGAGACAGCTTCGA
GGACTAAAGAGCTTGAGTGATGGTCAACAAACACGAGCTTGGATTCGCTGTGACGTAGAAGGACGGAGAGTGCATGAGCG
TCTAAACGTGGGTTGATGTTGTTGAGGACTGCGCCTGACATCGGAACTGCGAACTGAAGCTCGTAGACAGATGGGACGTT
TGGACCAATAACAGAGACAACTTGGCCGCGGTTGATTCCGAGGGAAGCGGAAGAGAGAGTTGAAGCTATACGGAGACATC
GAGAATGAGTTTCAGACCAAGTATGAACAGTGGTTGTGTGGAGGAGTGAAGGAGAGTCGCCGAAGACAGAGGCGGCTCGT
TCTAAGAAGCCAAGAACAGTGAGAGGACATGAGTTTGAAGCGTGTGGGAGTAAAAGTTCCATAGTCGAATGTATTGATTT
TTTCTTTTGTTATGTTTTCAACTTCTGATGGTGCATTGGTGAAATGAATTATATATTTTTCCCGATGTGCTTAGGTAGAA
CAGAAATCATTAACTTGAAATATTTTATTTTGAACTTAGGCTGCTTGGGTAATACATTTCTCTTTTTTTGGGCTCAACAA
CTAATTAGCTTAGGCTTCTTGGCTAATACTTTTTTCTTTTTTTGGGCTCAACGGTCATTTTTTTCAATTATCTAAGTATT
GAACCATCTATTGAAGTGGATAATACCGATTATAGAAAAAGATTGATCGATTGTTTGCCCCCAAAACAAGAAAGATTGAG
AGATTTATTTTGATTGATTTGAACATCTAATAGTAATAAGTGAAATCTTATGTTATTTAACTACTGTAAATATTTTAGTT
AAAATCTTATCTTGTTCGATGAATTAATCACATGTTATATATACCCTTACGGTCTATGGTTGGTCGGCCTCGTAACAATA
ATACTCATTAAGCTTTTTTTTGTTGTTGTTTGAGTTTTTACTCGTAAGATATTGTAGAATAGATTAAATTTATAAGAAAA
TTATCCGATGAAGCATCATCTCTTTGGTCAAGAATCAGTTCATTATAATGTTAAACAAAGTGCAAAATCAGCAGATCAAA
AGGGCACTGTTGATGAAAAGAATTTACTCTTAGAAGAAGGTTTACCCTTCAGAATCCTTTGTCTTGCTTTCAAAAGTTAG
CAACCAAACGAAAACAAATTTGTGGAGAAGAATCAAATATTAAAGTGTTGAAAGTTAGGTAGATGAGACAAGAAGCTGTA
TTTTGCTTGTTTGCTTATCAATCCAATCCTTCATTTGATGGATTGGAATGTCATCTGTTCTTCATCTTTCAGTGTGTCAG
CTGCGTTTAGAAGCATGTCCATTCCTCCTACGCTTTGATCCAATTCTCCATTGTCTTTACTTTGCGGTTTGCCTTGGAGA
TTCTTGGGTTTTATTCCTTTCTGTTTCTGCACCGTCTCCATCTTCTTCTCAAAAGCCTTTCGTGCTTTTTGGACTTTAAG
AATTGCAGCTTTACATGCTGTGCAAAACCATTCTCCATTTGGAACCGATTCACATGGAGGTCGCATGCAATAGATGTGAT
ATGCATCATCACACCCATCACACAAGACGATTTTATCATCATCCTTGTCAGTTAGGCAATTTCTGCATAAGCATGACGAG
CAATACCAACGGACACCGTGTAGTTTTATTTGCCTTGAAGTCAAGCACCTGATGTGGTAATACTTGTGTGGGCAAAAAGG
GTGATCACATGTTATATACTTTCCGCCACTATCCACCTTTGTTCCACAGGTCCTACAGAGTTCAGAATCTCTACTCATCT
CTACGTGGTGCACCTCATGATTCATGTTACAGCTTGAATTCTCTTCAGATTCGTTCGAATCCTCTTTGCATTCTGTACTC
GTATCAACAGATCTGTTATCTGTCTTCATCATCCCTTGGGTTTTCATTTTTTCACACACTACACAATTCTCATGAGGTGA
TCCGATTCCCTTAGATGTACAGTCTAGACAATACCAACTGTGTGTTGGCATCCCTTTCCCACCAGGTTGTGCACACGAGA
CATGGTACATATCTTCACAATGATCACATGCTAAACAGTCTCTTGCCTCTGCCTTCTCTCCACATAGCTTGCAAATGTCA
GAAACACTGTCATTTCTGATGTTCTCTGCATTAGGACAAGGCTTCGATTCCCCAGTGTAGAACTGCTTCAACTTCCAGAT
TTTGAAATAAAGAAGATATTAGAGGATTGATGGATAAAGT