| Basic information from miRBase |
| hairpin accession number: MI0005105 |
| Located between position 29422452 and 29422574 on chromosome 1 strand + |
| mature miRNAs for MI0005105: |
| ath-miR775 (MIMAT0003934): TTCGATGTCTAGCAGTGCCA |
| References |
| [1]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [2]Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC, PLoS One. 2:e219(2007)., "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [4]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GAGTTGAAAGATATTGTGTTGTGTTGTGTTTGGTTCTCTGGTATCGGTTGGGGGATTTATTACGAATGAGCACATTTTTA
TTATTAATTAACAATAAATTTGAAGGAGACTTAAATTGAAATGTGGTTATAAGTTATAACGGTGGAGTGACTGGAGTCGC
ATCACATGTAAAATAATTAATAATTTACGAATTTCTTATTTGTGTTAAGAGAAAATAAAACGTTTTTATCGTTCCTCGTA
AATTGTTTTTTTTTTCTTTTCTTATAATTTGTTATATAATTATATTAATGTATCTATTTGTATTTTGGTCTCATGTAAAC
TCTATCTATAAGTCAAAAGATTGCATTGCATGTGTACACATTATTCTAGTAAGAGAAAAAAGGTTTTCTACAAGAGTCTG
GATTATTTTATTTTTTTGGGCAAAGAGTCTGGATTATTTAATTTTTCGAAATTGAGAAAAAACGAAATTGAATGAAGTTG
TGTGCAAAATGTGTGTTATGTGACCTAAAGTATAGGCTTTTTTATTTGGCAGCACATACAATTGTTATTATTTGTGATAA
AAAGTAGATGGCACGAATGTTACAAAAATCTTTGTATCTGAGATCGAGAGGCATGTGGTTAGTCTTTAATGTGAACATAA
GGTTGCGACAGTGCGTAGGTTGGGAAATTAAATTCGACTATCTAACTTAATATTCAAGTTTTTCTTAAAAAGAAAAGTAT
ATTAGACTGAGACACAGATATTTTGTTGAAGACCAAAAATTATATAGACGACTTAGAAAGCTTTGTCAATTTTGGTTATA
AGCGTCTTTTCTTTGTCAAAGTTTGGAGAGTCTTGAATCCGCCAATACTCTAGAAGAAGAAGAAAAAAAAATCATTTTTC
ACAGAATTATTTGAAATAAAAAAACGTTCATTTCTTCAGCTTATGGCTAACCTAATTTTAATTAGAGTTTAGGACACGTT
ACGAGGACAATCAATTGAAGACAAAGTGGTAGATATGTTGGTAGCTTACTTATTACTACAATATTTAAGATGTACTTTGC
ATGTATCAGGTTATTACTGGCGTGGCTTCATGTATGTACTTATATACTCGTAATAAATATTTTGGATTAAATGATGCTAT
AGTTTTACAAAGTTCGATAACTAATTAGTGCATGATGATCAAAATGGTGTGGAACAGTTGTATATAAAACTGAAATGATA
GATGAACCAAAGCACAAAGCCGAGAGTTAAAATACACAGTAGACGACAAAAAACAAATACACAGTATTATTGTAAACTAG
GAGTTAACAAGAAGACTAATTGAGTTATGTAAACTATTAAACCTGATAAACACGATCAATGATTTACCTTCATCATATCG
CCTCAAATTACATTTTCTAACCGTCTGTCTTATTACCATTACCATCGCCTGAAGTCCACGTAGAAAGATTGTATTTAAGC
ATCTCTATGATATACATGCTCTCTTCGCATATATTCTTGTCAAGGCCATCGAGTTCAGTGATTGCTTCATCGTAAGCTTT
CTTAACCAATTTACATGCGCTGTATAAATTCACATATAAAATTACTATTAGTTAACTGTAAGAAACTAAGATATTCAAAA
AACTGTAAAAAACTGTTCATTAAAATTAATTGGCAATGAAAATATAAATTAGTTATTATATATACAAAGTTTTTGATAGA
TTTTGAAACGCCGCACTTATTTTATTTATAAGCAAATGTGATATTACCTTTCAATAGATTTATGGATCTCATAATTGAAT
ATCGAGAAATTTAAAGCCAATCCAAGTCTAACCATATTGGTGGGTGCTAAACTATTCTCTGCCATTTCCATTGCAACCTA
CAAAATATATGCCTTTTTCATGTTTTTCCATGCTTTTTCCAAACTAATATTTCGAAGAAAATAGGGGAAAATAAAATATT
AAAGTTGAGGGTAAACATGATTGAAAGAAGACCTTATATGCATCTAGAGAATTATCTGCATTTTCTTTACGTTCAGCATC
AGAACCAAACTCTGCCATATATCGAAAATAATCTCCTTTCCTACACATACCAAGAAACAATATAACAAAATGCTAATTAA
AAAAAAAAAAAAAAAAAGAGTTGATCATGATTATGATAACGGAATATGACTTACACTCTGTTAAAAAGGACAATTGATTC
GACATTAGTAGTAGTTGATGGTATGAGATGAGAATCAATGAGAGACAAAATGTCATTACAAACATTGAAAAACTCATATT
TAACCATTTCTTGTTGTCCTTTTATCAGTTTCACATTTTGGTCGTTTCCTTTCGAGTCTTCCATTTTTTCAATGGATGAT
ATTACTCTCAATGAAACTCTCTTAGCCTCCATGACATTCTTGTATCCAGTTGTTAGTAGGTCTCTTTCCTCTTCACTTAG
CTCTATATCAAGCTCACATACTTTTCTCATCGATTTCATCACATCTGCCACAACAACCGCTTAGTTACTTCTTATAAGGT
TATAGAAAGATGGATAAAGTTGCTACACTGATTTCTTCGTATACAAGAGTAATTTTGGGCATTTCTAAGACCCTGATAAT
AGATATCAAATGAAATGATTTGATATTTGAAGAGAGACATAACACATCTTCTGTTATCATATGATTCGAGTAACCATAAG
TTTGTTTAAAACACACAAACTGGATCGGTGACAACATGAAAAACATAAACCAATATGATAATTAACCTCCTAGTTTAAAT
CAAATCAACTATCTCTATGAAAAGGGCAAATATGTGAGAATATGTGATACCATCATATCTTCCAGCTTGGCAACCGAGCT
TAGCCAAGTAAATCAGCTTTTCTCTCTCATTCTCCATAACTTTGATCTCTAAGTTCTCTCGGTCTATGTTTATTATGTGA
GTTAAGGGATGCTCGATGTTGATAGAAATGTAATATATATGGTGACAAATATATATATATATAATATATATGGATTGTTG
AATCCAATTATGTGTCGAAGCAGATCTCGTTTATCAGATG