| Basic information from miRBase |
| hairpin accession number: MI0001002 |
| Located between position 24293093 and 24293298 on chromosome 5 strand + |
| mature miRNAs for MI0001002: |
| ath-miR391 (MIMAT0000933): TTCGCAGGAGAGATAGCGCCA |
| You can find this miRNA in ASRP: miR391 (accession: ASRP1728) |
| References |
| [1]Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC, Plant Physiol. 138:2145-2154(2005)., "Expression of Arabidopsis MIRNA genes" |
| [2]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [3]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CAATGCTTATGGTATTAATGAAGGGTTTGTTCCAGAATACAATGTGAACTTCAGACCAGAGTATAACCCAAACCAAAACC
AAATCCAAAACCAAAATCAAGTTCAAATCCAAATCCAAAACCAGAGTTTTAAGAGAGAAAACATCTCTGAATATGAACAT
CATCATGGTTATCCTCCCCAGTCTAGATCTGATTACTATTAACCCTTTGTTGTGTGATCCAACTTAAGTCTCTAGACAAA
AAGTTGTGTGTTTAGGTTATCTTTATTTCTTCTTATTTATGTTTCTACATGTGTTGTTGTTGTTTTTCTTGTTCTTGTTT
AAGTATTATGTTGTATTGTGTTGTTTCATTTCAAAATTATGTTATTGCTATATATAAATTATATGTGTCGGAAACAAATG
CATTACGCCTCTGAAAATACTAGTCTGCCATGGTTACGTTTACGCATTTTGGGCAATTGCAGAATTTTAAACACAGAAAG
GTAATAATCATAATCAATCATGTACTATTTTAAAATAAATTTGCAAAAAAGCATAATGAAAATTTCTGTGTGCACCATTT
TTCAACTAAAATAGTACATACATTATCCCACATATTTTGGTACATTGTAAAAAATGAAATGACAGCATTACAATGGCTTT
CCCTCTAATTTCATTCCTTATAATGATGAAATACAGATATTGTGAAATATTCCTAAAATGATAAAAATCTAATTCTAATA
TAGAAAATATAATAAAATTAATGTTAAATTTAAGGAAAATATAATAAAATTAAGGTTAACTTTTAGTTGAAAAAAAGGCT
AAATCTATGTCACATCATTCTATTTAATTAATCCGTGCAGTATACTCTAATATTTATTTTCCTTAAAAAAGATTAAATCA
TCATCAAATATCTAGTATGTATTAGATATCAATCTAAAAATAAATAAAAAAATTGTAAGAACAATACAAGAGTATCCACA
TATGTAAGAACTTAAGAAATGAAATTTTCAAAATCAAGCAAAATACTTCAAAACTAATATATATATTGTAATTTTGAAAA
CCTTAAAATCCAATGGCATGCTTTACACATCCCATAAACTCACATATCTCTCGAGTAAAACGGTACACATGAGACATCCA
TGGAGACCAGAAGAAACACAAACAAACACATAAATGGATTCAAAGACAAAGATAAAGTTGAAGTTCTTTTGTGAGCAAAA
CACACTTTAAAACATAGGAAATAAGCTTCTTTATGGGTATCAAACCCTAGTGATTGTAGGAGAAGAATCAGGCTGGCTCA
CAGAAGATGACTTTGATGCTTCCATCATGAGAGCAGCTTGCTCTAAACAACTCTTGTTATCGTCATTCGCATTCTCCACT
TCCTCTTTCGTGTATAAGTGTATCTTCCACACCACATTGCAGAAATCACTATCCATAGCAGAAAGCCAATTTCAAGTTAG
GAGAAAAGAAGTTGTGATTGACCTTTAGAAGGTATGTATAAAGAACTTACTGCCATGGATCATCGCCAACGACCATCATA
TCGTTCTCACTATCAGTATATAAGATCCTCCATCCTTTTTCAGGATCCCTGAGAAGCCCTTCCATGTTGAACAGCCGTTC
AAGCTCCATAAGGAGATCATCATACCCGTTAAGTCGCGACAAATCAATAGCTCTCCCCACTTGGCTTCCTTGCTTGTGAA
CCTTTTGATAACAATTCAACACAAGAACTGATTAGAAGAGACATCTAAAACTGCAACTCAAAGTAGCCAAAGAGATGATA
AAGAAAACGTTTTACCTTTGTACAGATTCTTTTGCTCGAGCTTTGCGGCTTAGATGCAGGTGTCTCCACTGGTAAGGAGA
ATCCGAAAAGTTTACATCCTGATGAAGCATTCATATTCAACTCACTGCCTTTCTGTTTTCCCATCATATCAATCTTGAAT
GGCAAATCAGCTGTAACATTATTTGGTAGGCCACCTTCATTTTGTGCATCAAACTTTCTAGTCTCTTCACCAAAGTTTAT
TGCACGTGAAGGGGGACCCGAGGATTGGTTTCCCGCATTGTATGGATTCTGATACGGAACATGAGTGCTCCTAATCCCAT
GCAAAGCTAGCGGATAGTAACTTGACTTGTTGGCTTGGTAAGCAAAGGGATTAGGAGCAGCAGCTGGACTGAAACCAGCA
AATTGCGGGAATGATTTAAGCGAGCAAATTTCTTGACCTTGCAAGACCCTTGGAAACCTATCCAGGTCCATAACACCTGA
ACAAGCTGGGTTCACGCCAGTAGCATCTACAAACTCACCAAATCGATCCTTGACTCTACTCGACACAAGAACTGGATTTG
CATGAGACTGCATCGCAAAATCCAGTATCCGGCGGTTCATAACATCAAACCCCTGTGAGGGTGATGCAGAACCTATATTT
TCTTGACCTTGCAAGACCTTAGAGGGTCTAACCGACTCCTCAAAGTCCAAAAAACCACCCCTTTCTGCTGCAACCAAGAA
CAGTTATCAATAATATACTGATGAAAATTGAGAACTGTTTGCAAAAGCATATACTCCAAAGAGAAGAGAGGTCTATATAA
TTTACTTGTTATGGGGTTTCCGGGTGGGGTAGTATCCAGTAAACCTGCCCATGGCCTTTTAGGCCTTGGAGATGACTGAA
TGCTCAAGTGTGGGAGAGAAACCGAGGGATCAATCTCCCAAGGTGAAACTCTTTCTTGATGATCACTCACAAAAGACTCA
TCCCATCGCACCTGCCAAACAAATGTGAAAGATTTAGATATCAATCTTCGAAAATGAAAAGTCTTCTACACGTTAATAGA
CAGATACTCCAAAAAGATGAGAGGACGCACCAACAAGCACCTCCATTTAGAGTTTGGCCACCTATACGGGTCCAAGTCAC
AGACTCCAGTCACTACACCAGCGCATCTGCAAGAAAGATCGAATATAAATTCTCGTCCAACAATATTAGCTACACAACAC
AGAGAAAGAAGCAAGAAAGAAACAATACCTTCTCTCAGGA