Basic information from miRBase |
hairpin accession number: MI0000990 |
Located between position 22930089 and 22930204 on chromosome 1 strand - |
mature miRNAs for MI0000990: |
ath-miR171c (MIMAT0000921): TTGAGCCGTGCCAATATCACG |
You can find this miRNA in ASRP: miR171 (accession: ASRP444) |
>promoter (3kb upstream pre-miRNA, by PMRD):
GTCACGGAGGAACCAAAGCTTTAGCTTTTTTAGGGACCCATGCTTTTTTTTTCACTTCTATAGATCTCTAATTTTGGGGA
ATTGTGCTTTTTAAATACCCAAGTCAAATTCTTTAGATGATTATGAAATTTGTTGCTTTCTTTATGCTAAACAAAATCTT
TCTTGTGGGATCCAGCTGTCTATTCCGGTGGTCCCTACGGTCAAAGTAGTCATCACATTCACCAAGTTTGTCGAGCTTCC
GCCGGCGGAGACATTCTACACGCCGCTCTCAAGCCCAAGATTCCTCTACTCCGCCACCGCGGGTGAAGAAGACCATTCCG
ATGGCGAGAAACCCGATGCTCGAAATTCGATTTCACGGCCATCGACGTGGCTGAGACTAGCCACCGGAAAAGGCTCACAT
CGACGGGTAGAAGAGGAGGAGCAACAAACGCCGGACCCATTCGCTATACCAATTGGGTATAAATGGACAAGCATGAGTAG
TAGTAATAGTAAGTCAGGTAATAGTAGTAAAATGAAGAAATCAAAGTCTACTAAGAGAACTAAGTAGTATCTTCTTTGAG
GTATTAAAGATACGAATCAAGTCCTCTTTTAGTGTAGATAATCTGATATTAGTAAAATACAGAGAAGCTGGTTGTAGTAT
TTCTTTACTATACATTTATATTTTTTCATATGATTAAAATGCTGTCGTTTTTACTCTTTTCGTCGGTCATGGTCTAAAAG
AGTTCAATAATAAAAGCTTTCAGATAGAAGCACCAACTAAAGTAAAAATAAAATTGCATAAAAAGAAAAATAACTATTTG
TTCATGCTTTCCTTTATTTATGGATCAACATTGGTGGTTGTATTAACTTTTCTAGATACAATAATACTTTTTTTTTATAG
CAATTTTTTACTTTTTTTTGTTGCTTTAATATTCGTTATAGTATTCTGTACTAAACTTCGAACTAATGACTTTTGATAAA
GCAATCACTGAGTGTTCTGCTTTAGGTTACATAAGACACATTTTAGACGTTTTGGATTACATTCCATTCCAAGCTGGCTT
TGTATATCCGATTTAAATAACTTGACAAAGCTACAAAACCTATGAATTACCTAATGAGAGTCCTTAAGAGACTAGAAGTT
GAAGTTAATAATATATAGTACATACATAATAGAACACTTAGAATTGCATAAGATTTATGTGAAAATAAAGTCTTTTTAGC
TGTAAATCTAAAGAACATAAGATAGATCTGTCACATGGAATGGGACATAATTAGATGGCTTAAATCACGACCAATATCAT
ATGCTTTATACCTAAATATTCCAAAACAATGTTTGCTTCGCAAGTCGGAAACGAACAAACTTGAGTTAATAAAGTGCATT
CAAAGACAACCTAAAAAAAAAATATCTTACACATTAACAAATCTAAAGATAAAAAAAAAAAAAAAAAAAAAGACAACATA
AACTACAATATTTTACACTTTGTCTAATAAAGAAAAGAACAACACATCTACTATTTGTCTCCATTCTCCGCGTTGGCACT
CATTTTGCTAAATCAAAATCGTCTTTCTCCTCCAAAGAAGACCTCTCAAAACATTACAGGTAATTTTTCTTTTCTCTTCT
ATTTTCTTAGTTATGAACGTAAGTCATGTTTTGATCCAATATGAAAAAACGAATAATTTGTATCTCTAGATGTTTTTATT
ATGTTTCTTTTGATTGGTTGAAGAATTCATTTTGATATCTAACTATGATTTTCTATTTAGTTTGCGAAAAGATATCGCAA
TATGGCAAGTGAAGCACCGAGTTGGGCAGATCAATGGGGAACCGGAGGGATCGGGGAGATGCCGGAGGAAGACAACACCA
AAAGCAAGAAAGATGCCGGCGGTAAGAACTCTGGCCAAACCAAATCAGCCAAGATTGTTGATTTCGTAAGTTTTAAGTGG
ATGAAGAATCTTGTCCATAAGAAGAAGAAAGACTCTGATTCTTGAAAGATAAGAAAGAATCATTAAATTTCGATGTTTTG
GAAGAAATTGTTTCTTCCTAAGATCTCAATTTATCTATCAATCTATTTATTTATTTTTATTTGTTTTGTCTTTCATATGA
GTTAATGCGTTTTGGTGCATCCCACGATCGAAAGTCTTTTGTTCTTTACGACATGGTTTAATATTTTAATAACATGTAGG
CAACGCGGCCTCGCTTATCATTAGTTGTTTCTTTTCTCACAAATTGTTTACCACACACGTCACACTAGATTTGCTAACTA
AAAAAAAAAAAAAACATGTACGCACCAGAATCCAGATAGTCAAATTCAACCTCAGTGTTTGCAAAAACATGAATGACATT
GTAAGAGAACTTAATTCATTTTAAATAACACCAAAGATACACTACTTATTTAGTAGATGTCTTTTTTACCACAAATATAT
TGCCTAAATATTAATAGATGATCAAAAAATGGTAAAAGAGAATTAATAATAGTTGGATGACACAAGTTGTGTGTCCAAAA
GTAAAACCCAAACTAACAACTTAAATTCAAAGCAACATTTACATTAATAGTAGTACATATAACTTTTGCATATTCATAGT
GTTATAAAAGAGCATATAATATACACATCAGCACAAAAGCATTGGAAGGCACACATTTAAACCAAACCAAAGGTGTTCTC
TCCACTGTAAGTCATGTAGAGAAACCCATCTTCGTCTTTGTTCTCATCATAGATTGCAGACATCATTGCAGCTGCAAAAA
CATCAATAAAGAAATCTTTTATCATTGTTTCGAATTTGCAGAGAAGTGTATGCGTAGATTACAGTACTAAGTTAGCAGCG
GATTTCATGAGAGCGAAATTAACATAAACCAGCTTTTATGCTAAGAAGTTGTGTGTTTACCAGTTGGAGGCAATGTGTTC
TTCACAAAGACGAAGATAGCCTTTTCGGCACTCAGCTTGATTCTTTTACGGACAACATACACAAATTGCCCAACAGTTAG
ATCAGCTGGAACAAGGTACCTGAATCCAACAACCAAAGAG