| Basic information from miRBase |
| hairpin accession number: MI0001006 |
| Located between position 28568808 and 28568928 on chromosome 1 strand + |
| mature miRNAs for MI0001006: |
| ath-miR394b (MIMAT0000937): TTGGCATTCTGTCCACCTCC |
| References |
| [1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
| [2]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CTTTAAATATGGTATCAACAACATATGCTTATGCTATGCATCATTTTCGCAAACTATGGTGTTGTATGAATTAGTGGGTT
GTTCAAGATGTTTTTTCTTAAGCGAAAACCTATTTATACAGTTTGCAATGGATATAAGCTTTTGCAAAGTCTACAAAAGT
CACATCTCACCACAAAAAAAAAAGGTCTACAAAATCACATGTATCTTTGGAAAAGTATCCATGCTTAGATATTTCATATT
TCTGATCCAATTATCCAAACAAACATGTCAACAGATAAAATTAAAAAAAAAGCTAATCTTTTCAAAATATACAAGTCAAA
CTGTCAGAATATAACAATTTAGACTAGTTGATAAAAATATATTTTTGAATAAGAACATTTTAGATTAAATTTTGGTACCA
TAAAATGTTTGATAGAACGACGAAACCATTTTGACATATTAACGGCAATCTCGGGGAAGAAGAAGAAGCGGTAGAGAGAA
AACCGATGCTCACAGCGTTTGCAAGTCACGCGCGTTCTCACGTTTTCGCGTTTGTTACCGTCCCAACAATCACGCGCCGC
CTCCGTATAAATATCTTACGCCAATCACCTCTCTCCTCTTCTCTTCTCCTAAACGAAACCTTCTCCAATCGACCCAATTC
TGTTTCTCGTCGTTGTTATTGTTCGAGCTCTGCGATAATGGGTTCTTCTTCGGTGTTTGGCGAGCAATTACAGTATCCTG
CGACTCGGCGTGATGATTCCGTCGTCGATGACTATCACGGCGTCAAGATCGGAGATCCGTACCGTTGGTAAGAGTTCGTT
TCCAGCTGCAATTTCTCTTATTATGCTTTTAGGTTTCCGGATGAGAACGATATTTCCAAATGAGATTTTGAACACATCGC
TCTGAGGAATTAGCAGACATTGGATTTGACTTGGAGATTGACCTTGAGAGAAATTCCTAAATTGTTCGTGATTTCGTGTG
ATTTGTTCATTTTTGCTATGATTTAGCGTTGAATTTGTCATTCTGGATTGTTGCTAGGTTAGAGGATCCTGATGCTGAAG
AAGTGAAGGAGTTTGTGCAGAGCCAAGTGAAATTGACAGATTCTGTACTTGAAAAGTGTGAAACAAAGGAGAAGCTCCGT
CAGAATATAACGAAACTTATTGATCATCCTCGTTACGATTCACCATTCAGGCAAGGGGATAAGTACTTTTACTTCCATAA
CACTGGTCTACAGGCTCAAAGTGTGCTTTATATGCAGGTATTTGTTGAGATAAAGGCGTTTGTATCAGTGCATACTCTGT
TCTAGCTTTGTTTTCTCATTGAATTTGATTGCATTCGGGTTCAGGATAATCTGGATGCTGAGCCAGAGGTTTTGCTTGAT
CCGAACACTCTTAGTGATGATGGAACAGTGGCCTTAAACACCTTTTCTGTCAGCGAGGATGCTAAGTACTTGGCCTATGG
TCTTAGTTCAAGTGGTAGCGACTGGGTGACGATTAAGCTGATGAAAATCGAGGATAAGAAAGTGGAGCCTGATACTTTAT
CATGGGTATGGTCTTAAAGATGGTACTGACTAGTGGGGTTGATCAATAAAGTTCTACCGTCCAGATTTCTGATAGATTTA
TGTTCCTCTCGTGGAACAGGTTAAGTTTACCGGCATTACATGGACGCACGACAGTAAAGGATTTTTCTATGGTCGCTACC
CAGCTCCCAAGTAAGTACAAGATGTGTTGGAAGAAGCCTTTCGATATAGTTCAGAAAGCTAAGTTGATTTACCAATTTTA
TCTGTTTTTGTTTTGCAGAGAAGGAGAGGATATTGATGCTGGCACTGAGACTAATTCTAACCTTTATCATGAGCTGTATT
ACCATTTCATTGGGACGGATCAATCTCAAGATATCTTATGCTGGAGAGATAATGAGAATCCCAAATATATGTTCGGAGCT
GAAGTCACTGACGATGGGAAGGTAACACACCAAGTTCTTATGTTGGTTCTTTAACTATGGTTACGCTCTTAAACCTCAAA
TTTATTTTTTCTGCGCATACTTACGGAAAATCATTTTGATCGTTTCCCTTTTTCTAAATGATGGTCATGACTTCAAACTG
TGTTACCTAGTTTTGTAGATCTGGAACTTGGATTCTTAGTTTTAGGTCTAATCAATGTTATTTCTTCTTGTAGTATCTGA
TCATGAGCATTGGAGAGAGTTGTGACCCTGTCAACAAATTATACTACTGCGATATGACTTCATTGTCAGGAGGTCTTGAG
AGTTTCAGAGGAAGCAGCAGTTTTCTTCCATTCATTAAGCTTGTTGACACATTTGACGCGCAATATAGTGTTATCTCAAA
TGATGAGACTCTGTTTACTTTCTTGACGAATAAAGATGCCCCTAAGTACAAATTAGTCCGGGTTGATCTAAAGGAACCAA
ACAGCTGGACTGATGTTGTTGAAGAACACGAAAAGGATGTCTTAGCATCAGCTTGTGCTGTCAATGGGAATCACCTGGTC
GCATGCTACATGAGCGATGTAAAGCATATTCTGCAAATTAGGGACTTGAAATCTGGTTCATTGCTTCACCAATTACCTCT
AGATATTGGTTCAGTATCTGATGTTTCTGCTCGGCGCAAGGACAATACCTTTTTCTTTAGCTTTACTAGCTTTCTCACTC
CTGGTGTGATTTACAAGTGTGACTTAGCCAATGAATCTCCAGAAGTTAAGGTATTCCGGGAGGTTACTGTACCCGGATTT
GACAGGGAAGCATTTCAAGCCATTCAGGTAACACACTCTCTTGTAGCGTCTTCCTGTTTCTTTCATAACTACTTTTTACT
TTGCATATGTTAAAGTGGTTTCTGCTCCTCTTTATAGGTCTTCTATCCCAGCAAGGATGGAACAAAGATACCTATGTTTA
TTGTGGCGAAAAAGGATATTAAGCTTGATGGATCACACCCATGTTTGCTCTATGCATATGGTGGGTTTAACATAAGCATA
ACACCGTCTTTCAGTGCCAGCCGTATTGTGCTTAGCAAGC