| Basic information from miRBase |
| hairpin accession number: MI0002409 |
| Located between position 1523306 and 1523503 on chromosome 4 strand - |
| mature miRNAs for MI0002409: |
| ath-miR447c-5p (MIMAT0020346): CCCCTTACAATGTCGAGTAAA |
| ath-miR447c-3p (MIMAT0002115): TTGGGGACGACATCTTTTGTTG |
| References |
| [1]Allen E, Xie Z, Gustafson AM, Carrington JC, Cell. 121:207-221(2005)., "microRNA-directed phasing during trans-acting siRNA biogenesis in plants" |
| [2]Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC, Plant Physiol. 138:2145-2154(2005)., "Expression of Arabidopsis MIRNA genes" |
| [3]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [4]Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD, J Exp Bot. 62:1611-1620(2011)., "MicroRNA activity in the Arabidopsis male germline" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TTCCGCTTCATGTGGCTGCTCGTGATGGTCATTTAACAGTTGTTAAAGCTCTTGTAGCATCGGTAACATTTTGTTCAGAT
AGACTGGCTGAAGAAGATAGGGAGAGGCTGAATCCATATATTCTAAAGGACAAAAATGGAGATACTGCTCTCCACTCAGC
CTTGAAAGACCTCCATGAAAAAACAAAAGAACTCCATGAAAAAACAAAGGTATCGCACATAATATCAGTTAAATGACCTA
AGAGACTCTTTAGTTAATAGTATTTATCACGACAAAACCTTCTGTACATCAAAGCAAAATTTATATCGAATGTTATTGCA
CCAATTTTCTCTCAAGTGATCCATGTCTAATCCTGACCTTAACTCGTACTATTTTCACTCGATGGTAATTTTTTTTTTTT
TGCTTGTATCCCTTGTTATATTAGGATTCGACTCTTGGTTACCTCTGTTGGTCTTATAATTCTCTTAATACCTCCAACAG
TTTTACCAATCATTATTTTCCTAACTTTTGATGTATCAGCAACAATCCATAAACTTAGGATCCTTGATTCCCTATCTATT
CTACAGGATATGCATTGGCTACGACGTAGCAAATCCAAGTCACTTTCTAATGAATCTACACACCTAATGGAGACAGCTGC
TTGTCTAGTCAATGCGAACCAAGATGTTTCGTTTCTTGCAAATAAAGATGAAATCTCCCCCTTGTATTTGGCAGTTGAAG
CTGGTAACGTATCACTTGTAAATGCAATGTTGAACAGCCATGTTAATAACGTTCAAGACAAAACCTTTAACTTAGCCACA
CAATTGAAAGGGAGAAAATCGCTTGTGCATGCAGCTTTAAAGGCAAAGAATACAGGTGCGTACCAAATTAAGCGTTCAGA
CTTCTTTACTCGAAGAACCTAACCAAGTTCCTACTTGTTTCTGCAGATGTTCTTGATGTTATTCTCGGTAAATACCCGAG
TCTTGTCAAAGAGCGAGACGAAAAAGGACGAACTTGTCTTTCGGTTGGAGCATCTGTAGGGTTTTATCAAGGCATATGCA
AGCTGTTAGACACATCAACGCTAAGCATCTTTGATTGCGACGATGATGGTTCATTTCCCATCCATAAGGCAGTGGAGAAA
GGTCATGAGAATGTTGTTAAAGAGCTTCTAAAACGTTTTCCGGATTCAGTAGAGCAGCTTAACAAAGAAGGTCAGAACAT
TTTCCACATATCAGCAAAGAGTGGCAAATCCACATTGTTTCTTATGGAACATATCAATAAAGTCGATACGAAGAATCATC
TTATGGAGGAGCAAGATATGGATGGGAATACACCTTTGCACCTGGCCACCATAAATTGGCGCCCTAAAACTGTTCGTATG
CTTACTAAATTTCTTTCCATCAGAAAAAAACTCTTGGATAAACATAACTCCGTTGGCTTGAGACCTCTGGATATCGCAGA
GATAAATCTGCAGTCTGACTACGTTTTTCGAGAGGTATAACATATCTCTTCCTATACATACAGTTCTTTTTGTTCCAATA
TCAAACCACATAGATCTTATATAGTTTTTTTACATCTTTCTGGGGACACAATAGAGAATGACTTTGATGGTCTTGCTAGG
CGTTTACAATCTAAGACAGAGAGGTATTTCTTTGCTACCGACTAGCGGGATGACACTAAGAAGTAGATCAGAAAAACTAG
GTGATGGTGAAAAATACAAAGACCGTGTCAACATTCTTCTACTGGTGGCAGCTCTTGTAGCCACTATGACGTTTGCTGCA
GGTTTTACAATGCCCGGTGGCTTTAGCAGCTCTGCTCCAAACACTGGCATGGCTATTTTGGTCGATGACCGTTACCTCAC
AACATTTATTATGAATGACACTATTGCAATGCTTACCTCAGTTTTAGCAATAGTTGCTCTTATCTGGGCACAGTTAGGAG
ATCCAGAACTCGCGCACAGAGCGTTTCATTTGGCTTTACCAGCACTCTTCGTTGCTCTACTCTTCATGTGTTTCACATTC
TTTTATGGCGTTCTGGCTACAATACAGCATAACATCGTGCTTTCACGCATCATAAGCTTTGTATTTATTATCTTATTTAT
TATGACCGGAACCCTCCTTACCCCTTACGTGATCCCGCAGGTTTACGGCCTTCCTATTATTGGAGTTTTGACTAGTTCAT
ATCTTGATTTTCTATTGCTGTTTGTTAATGAAGATGATGATGAAAAACATTACACCACCGGCTCATCTCACACGTGTGTG
AAGAGTGGGGAGTCCATGGGATCTTCAAGCGGGGTCCAAGCGGAAAAGTCGAAAGTGCTTTAAAGAGATTGCATCGTTTC
AAATTAGCTTTCCTTATTTGGGTCACTAAAGTCTTGGCATTTACTTTCCTGCTTGTAATAAACGCGGCTACTGTTAATGT
TTTTTCTTGGTTGTTTGTACAATTGTACTTAGTAATGTAATAGCAACAAAAAAAAAAGAAATCGAAGCGAAAAAAGATGT
AGAAAAGTCTGGATTTTTAATTGCTACTAGTCTCGACCTCTATATTCGAGGACTTATGTATGTTTAGAGTAATGGAATTT
TTGAGTGAAGCACGGAGAGATGTTGAAAATTGGATACTATATGGTTGTTATTAGACTACGCAGGAGCTGATTTGGTACAC
ACATACATATGTTCTGCTTCTTTCAAAACTAACATATCAAGTTCAAGAAACCAGTAAGTCGTTTATCTATTCCATGCTTT
CTTCTTTTGAATCATGCCTTGTTGTTTGTTTGAACATATCTTCTTACTTAGTGGATGGACTATATTTAAAAAGCTGCAGC
CCTCTTTTTAGCATAGTATAACCGCTGATGTACACCTACCAGCTTGATAACTCTTTTTCGTGGTTTCTGTGTACTCGTTT
CTGTTTGTACAGATACTTCTTGTTCAATTTCAGATGCTTTAGAAGGTTTTCGGAGTGGCTAGAGATCTGTTATCTGTATG
AACAGCTACTTGGTATCAGCTTCGTCATTTTATCAACACA