| Basic information from miRBase |
| hairpin accession number: MI0005394 |
| Located between position 28500 and 28706 on chromosome 1 strand + |
| mature miRNAs for MI0005394: |
| ath-miR838 (MIMAT0004260): TTTTCTTCTACTTCTTGCACA |
| References |
| [1]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
| [2]Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW, J Exp Bot. 61:165-177(2010)., "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis" |
>promoter (3kb upstream pre-miRNA, by PMRD):
ATAATTTTTGTGTCTTCTTTCAAGGTGGGACAATCATTCTTGTCTGCTTTGCAAAGTGATGAGAGGGTGAATTTCCAAGT
CGACGTGAAGTTTCAAGAATCATACCTCAGTGAGGTGGTGTCACTCTTGCAATGTGAGCTTCTGGAAGGCGCTGCTGCTG
AAAAAGTCGCGGCGGAAGTTGGCAAACCAGAAAATGGTAATGCACATGACGAGATGGAGGAGGGAGAGCTCCCTGATGAT
CCTGGTAAGTATTAATCACATTCTTTGTCTAATCGCTTTTTACCGGTTTTAGAAATCCAATATTAACAGAGCTCTATGGT
TTTAGTGGTCTCGGGAGGGGAGCACGTTGATGAAGTAATAGGCGCCGCAGTGGCTGATGGGAAAGTTACTCCAAAAGTAC
AATCATTGATCAAACTACTCCTCAAATATCAGCACACAGCTGATTTTCGAGCTATTGTTTTCGTTGAGAGGGTGGTTGCT
GCTTTGGTTCTTCCTAAGGTTAGGATTAAAGTGAAAAAAACAATTTATTTTCTTGTGTATAATTTTTCTGCCTATGTCTC
TCTGAGCCTGGAAATTTTCAGGTTTTTGCGGAGCTGCCTTCGCTTAGTTTTATACGGTGTGCCAGCATGATTGGACACAA
TAACAGCCAGGAGATGAAATCATCTCAAATGCAGGATACAATTTCCAAATTCCGAGATGGGCATGTATGATTTTTTTTGT
CTTTCATTAAGACATATTTTTTTTTTATCTTATACTGAAATGTCTTACTATTTCCTCTTTCTACTGTGATAGGTGACACT
GTTAGTTGCCACAAGCGTTGCTGAGGAAGGACTTGATATTAGGCAATGTAACGTTGTTATGCGTTTCGACCTTGCAAAGA
CGGTGCTGGCATACATTCAGTCTCGTGGCCGGGCAAGAAAGCCTGGATCAGACTACATACTCATGGTTGAGAGGTACATA
AAAAGCTTTAAGAACTACATTTTGATTTTTGTAACTACTGGTCACCAAATCAGTACTGATATGTCAACTTGTGTTACTTG
CAGAGGAAATGTATCTCACGCAGCGTTCCTAAGGAATGCTAGGAACAGTGAGGAGACACTTCGAAAAGAAGCAATAGAAA
GGACTGATCTTAGTCATCTCAAAGATACATCGAGATTAATCTCAATTGATGCTGTGCCTGGTACAGTTTATAAGGTGGAG
GCAACTGGTGCCATGGTTAGCTTGAATTCCGCGGTTGGTCTTGTACATTTCTACTGCTCTCAGCTTCCTGGTGACAGGTA
AGTTTGCCGATAATTTTTATTGTCCTAATGACCTCTCCTTTTCCTGTATGAGATGATGGATTGCTTCTCTCTCGTGTCTC
AGGTATGCAATCCTTCGTCCTGAGTTTAGCATGGAGAAGCATGAAAAGCCTGGGGGCCACACGGAATATTCATGTAGGCT
TCAGCTTCCTTGCAATGCACCGTTTGAAATACTTGAGGGTCCTGTTTGCAGTTCAATGCGTCTTGCACAACAGGTGGACA
TAATAGTTTGTTTGTTTATCTTACTTGTTATTTTCTTTCAGTGTTCCATGTCTTGAAGTATTGCGTGTTTGATATGTAGG
CTGTATGTTTAGCTGCTTGCAAGAAACTGCATGAGATGGGTGCATTTACCGATATGCTATTACCGGACAAAGGAAGTGGT
CAAGACGCTGAGAAGGCTGACCAAGATGATGAAGGTGAGCCTGTTCCTGGAACTGCTAGACATAGAGAGTTCTATCCTGA
AGGTGTGGCGGATGTACTTAAGGTAATATTAGCACTAACCTATGAAATTTTTGCTAAATGTGCTTTTAGAGGAATGTGGT
TTTCAATATTTGACTGTTTATACCATGCACAGGGAGAATGGGTTTCATCTGGAAAGGAAGTTTGTGAGAGCTCAAAGCTA
TTCCATTTATACATGTATAATGTCAGATGTGTAGATTTTGGCTCTTCAAAAGATCCATTCCTAAGCGAAGTTTCAGAGTT
CGCGATTCTTTTTGGCAATGAGCTGGATGCAGAGGTTGTTGTTTCTCTCTCCATGGATTTGAGTATTAGAATTTGAAGAT
GTAACCATGGTTAACTAAGATTTGTTTTACTGTATCAGGTATTATCGATGTCTATGGATCTTTATGTTGCTCGGGCCATG
ATCACTAAAGCATCTCTTGCTTTCAAGGGATCACTTGATATTACAGAAAACCAGGTTAGACTGAACAACAACCTCTATTT
TTCCTAACATTTATGTTTGCTTGAGAAACTTTTTATCTTATATTGGTGGCATTTCTTGTGCAGCTATCATCTCTAAAAAA
GTTTCATGTGAGGTTAATGAGTATCGTGTTGGATGTTGATGTTGAACCCTCCACGACACCATGGGATCCTGCAAAGGCCT
ACCTGTTTGTCCCTGTTACTGACAATACGTCTATGGAACCCATAAAAGGGATCAACTGGGAATTGGTTGAAAAGATTACG
AAAACCACAGCGTGGGACAACCCTCTTCAGAGAGCTCGTCCCGATGTATATCTCGGGACTAATGAGAGAACTCTTGGTGG
GGACAGAAGGGAATATGGGTTTGGTAAACTTCGTCACAACATTGTATTTGGGCAGAAATCTCACCCAACTTATGGTATTA
GAGGAGCTGTTGCATCCTTCGATGTTGTGAGAGCTTCTGGATTGTTACCTGTGAGAGATGCTTTTGAGAAGGAAGTAGAA
GAGGATTTATCAAAAGGAAAATTGATGATGGCTGATGGGTGCATGGTTGCAGAAGATCTTATTGGGAAAATAGTGACAGC
CGCACATTCCGGGAAGCGGTTTTACGTAGATTCAATTTGTTATGACATGAGTGCAGAAACATCTTTCCCTAGGAAAGAGG
GATATCTTGGTCCCCTAGAGTACAACACGTACGCTGACTATTACAAGCAAAAGTAAGAAAACATCTTCAAATAATTTTTT
GATTTCTTCAATCCTTTTTCTAAGTTTCATTAGATACTAA