miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001441
Located between position 22107346 and 22107456 on chromosome 1 strand +
mature miRNAs for MI0001441:
         ath-miR426 (MIMAT0001337): TTTTGGAAATTTGTCCTTACG

References
[1]Wang XJ, Reyes JL, Chua NH, Gaasterland T, Genome Biol. 5:R65(2004)., "Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets"
[2]Jones-Rhoades MW, Bartel DP, Bartel B, Annu Rev Plant Biol. 57:19-53(2006)., "MicroRNAS and their regulatory roles in plants"




>promoter (3kb upstream pre-miRNA, by PMRD):
CCGCAAATGGTTGGTCTTGTCAACAAAGAAGACAATTAGCGCTATGGAAAGGACCATGGAGACTCCTAGGATCCAATAAG
TTGTTGCTTGTGGAATCTACTGGGCTCGTGAGTAAAAAGCCAATGATTGCAGTAGTGAGACAAAATAGAGAGAGGTCTCG
TGCCATACGGTCCTGTACCGTGATCCCAATCACAAAGGGAGCCAATCCATCAAGCACAAAACACCACATGCCTAGAAAAG
TGTCCATGATAGATATCAACAATAGTCGACTCCTTATGATGCTGTCTATGAATGTTGAAAGCGTTGAGGTTAACACAGCT
CCTCCAAAGAGATATGCGAAGATCTTCACTTGTGAGTTGAGGACACAACCACAAATTCATATCGAATGACTAATATAATT
AGATCGGGGATAAGTTCAAATCGATTGAGTAGTCAAATTATATTGAGAATAAATTCAAATCAAATGAATAATAAATTAGA
TCGGAGACAAGATTGTGAACCAAAATTATGATGCCGTCTAGCCGATTTAACGTCGTGGACCAAAAAATATACAATTAATC
AAATATATTTCAAAACCAAATTTAAATTTTGTAAGAGATGAAAATCATATGAGAAGAAAAAGAAGAAGAAAACTTCATTG
TTCTTAAAAAAGATAAAAATTTAGAGTAAAAGAAAAAATAATAGAAAATGATAAATATAAAATAATAATAAAAATAATAA
AAAATATAGGAAAGAATTAAACATGGAAGCCAAATTTTTGGCAGCTTTTGGGCGTCTGCAAAAGAAAAAGCATTTATGTC
ATTTAATATTTGATATGTGGTAGATAATTAGAAAAGGATGAAGAAGAAATGATATTTTTGAAAAGAATTTTGAAAAAATG
TGGTAGTTCTGTTCATTTTCGCTTATATGCCAGAGGTGGCTGTTTGAGTTACAATGGCTGAATGGTTTCCTACAAAGTTG
GAACAATGACGTCATTAAATCATTTTGTGATTAGATTGTTTATTGGTCATCATTCAAAAAATTTAGTCTTTGGTGTATAT
AGGAGAATTAAATTACAGTTTTGTTGGATTCCAATATCATGTTAATAAAGTTTATATATATATATATATATATATATATA
TATATATTGATCATGATTTAATTCGTTCTATGAATTAGAAGTTACTAACTTACTATTTGTATTGTATATGTTTTGAACAT
GAAATTTCTGAACATATTAATGACTAGTTAGCAAATTAACAATGTATCAATGAATTAACAATATTCATGATTAAATTAAG
TGGGCTTTCTCATGTTTTATGGTTCTAGCTTTCTTATTTTCACTTAAATAAACTCAAATTTTATCCCAAAAAGTTATATA
ATATATCGTCCTTGGTTCATAAAATATCAAAAAAATATAATTCTTCTTTTGGTTTATATATATATATATATATATATATA
TATATATATATATATATATGGTATTCTATGGTGTTACTAATCTTCGTATAGATAAGGGAACCACTTATTAAGTAGAAAAT
GTGGTGGTGTTTAGGACAGTCCAAAGTTAGTTGTAGAATGTCGTTTTGTTACTTTGCTTGCCACTAAACACCCAAAACTC
TTATATATTATTCGTTTTAAACAAAGCACTTGTCTAATACTACATCCTTTAATTGTTTGGCTTCTTCTACCAAACCATTA
AGTCATTAACCATAGTACACTGAACCTAAGGATCCTTTTTCTTTCCCTTCTTTTTATATAAATAATGTTATACTTTCGAT
TAAGGTTTTTTATACGATTAATATTTTGTATTTATAAATGAAAACATTATTTTTATTTAGATAAGCACGATTTAACTAAT
AGTAAAACAATCTGCAAAATATTAATTATCTAAACCAATAAAAATATAATTAGTTTTGCATTGAAAGTTATAAATATCAT
CTAATCTAAAATAAATTTTCTCCTAAAACACCCAACAGTTTAGCAAAAAAAAAAAACACCAAAAAAAAAAACGCATGGAG
ACAAACACAAAACATAAATTACGTCATAGGTTATTGTATTTAACTCTTATCTAAATATTGAACATTTTATGATATAATAG
GGGAAAATTGAATTAAGTCATAAAAGTAGAAAAGAAAATTAGTCATTGGAGTAGAAGTATGAATGATAAAGGATTTAGAC
CCAAAAAAAAGAATGATAAAGGCAGATACAATACAAACTAGGTGACATTTATAGGAAAAAAAAAAAAAAAAAAGAAAAAA
AAAACTAGGTGATATCTAATTGCTGACAAAAGTGTTAGATCATAGAAGCAATCAAGCAACTAGATAATGTAAAACGCAAA
TCTTAGCATTATGTAATAGATATTCTTTTATGTGCGAAGACTAATTTCTTTTCATCACTCCTATATGTTTTTGACATCAT
CAAGTCTAATTCTTTTCCATAAATTATCAAATACTTTTCTATAGTAACAAAAACAGTGTGTGAAATGTCCAATCGTTTTC
CGACAAAGAGAATCGCCACCAGGACACTACATCAGCAATCACCAACTATGAAGGATCCTACAGAGCATGTCAACTTTTTC
GTAAACAGTTTTATGTAAATATTATAGACGTTCCAATCATGTGAGAATATTATTGCACATAATTTCCTTAAAAATACTGT
ATTTTCAAAATTTGCGGAAATGACATTTATTCCATATTACAGAGATACATATAATACTTATATACCCTGACCACGAGAAA
TCAAACAGTGTTTGTTTTGTAATTTACTTGTTCATTGATACGTTTTGCAATAGCTAAATCAAAAAAGTTTTTTTATGTTA
AAACTTTTAGGTTTGCAAATTATGAAAATAAAAATAAGGCCAAATTAATTTAATTGAGCTGGGAATGCACTAGATATATA
GAAACTCTGGAGCTGGATAAGGAAAATATGTATTATATATGTAAATTTCTTTAAGTCAAAGTATGTCCACCAAAGGATGT
TTAGAGACGTGCATTTCTGCACGAGTGATCTTACACACTT