| Basic information from miRBase |
| hairpin accession number: MI0005111 |
| Located between position 7423518 and 7423611 on chromosome 1 strand + |
| mature miRNAs for MI0005111: |
| ath-miR781 (MIMAT0003940): TTAGAGTTTTCTGGATACTTA |
| References |
| [1]Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC, Genome Res. 16:1276-1288(2006)., "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" |
| [2]Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC, PLoS One. 2:e219(2007)., "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes" |
>promoter (3kb upstream pre-miRNA, by PMRD):
ACAAAAGTGAGAGTCTTAGAATTTAACAAGATTATGAGGTTTTCTACGCCAATTAGCTCTCGCTGAGGCTTTCGAAACTG
AAACTCAACAAAATGGGTCCAAATTTTGATATTTGTGAAAAGAATAAAAACTAGTGTTAAATTCAACGAATAAGGAATTC
AAAAAGGAGCTCAAAATCGAAAAAGATCACATCTGGTTACTGGTTTCTGGAATCCGAGTGGTTAAGAACGTACGTGAAGC
TTGCCGCGGAGTTCACGGTCAGATCGGAGCTTGACATAGATCCTCTCTTCGATACTCAACCGAATCAGATCGAGTGGCTC
TCTAACGGTGGCGTCTTCCTCGACTGACATTTTCTGATTATAACTTCTCCGAGGGTTTTGAAATTGTAGTGCTCTCGGCG
ATATCTCTCTGACTGAGCTCAAGCAATCGCCACCGTTGGTTCCCTAAAAACTTCAAACCAACATCTTACGATTCGGCCTT
TTACTATGTTTTTGGGCTCTCATATCGGCCCAATATGGTTAGCTCTTTTTTTTTTTTTCGTCGAAGTATTATGAAGATAA
TAAATCATCTAATGCAAATAAATCATGGTTAGTGGAACTTAACTATATTAAGTCCAATCACAAGGTATCAATTGGTCATT
TCATTACACTAAATTTACTATAATCTTTATATTGGTTGTTTTAATCAAAAAGCCTTTTGTCATATACAGAGAGAGAAGAG
AAACCTGAGGAAGCTGACCGGAGAAGACGAAAGCAAACTTTTTTCTGTGAGTTTTACTTCCTTTGACTCATCTCTCATAT
ATTTACCGCTTTATTTTCTTCATCCCGATTCCTCTCTGCTTCATTCTCTCCTAAAGTTTCGATCTTTAATATTCCCCTAA
GATCCAGTACTAATTTTGTTGACAAAGGTTTTGACTTTTTGAGATCTGTTTTCTCTTCGATTTCTCTGATGAATTAGGAA
GAAATTTGATCCAAAAATGGATGGGAATTTTCCACAAGGAGGTGTAGTTCGTAGTGGAGCTTCATCTTATGGAGGATTTG
ATTTACAAGGTTCTATGAGAGTTCATCACCAAGACTCCATGAATCAGCAGCATCGACACAATCCTAATTCTAGACCACTT
CATGAAGGTCTTCCCTTTACTATGGTTACAGGTCAAACCTGTGATCATCATCAGAATCAGAACATGTCTATGTCTGAGCA
ACAGAAAGCTGAAAGAGAGAAGAATTCAGTGAGTGATGATGATGAACCAAGTTTCACAGAGGAAGGTGGTGATGGTGTTC
ATAATGAAGCTAATAGATCAACTAAAGGATCTCCATGGCAACGAGTGAAATGGACTGATAAGATGGTGAAGTTGTTGATT
ACTGCTGTTTCTTATATAGGAGATGATTCGAGTATAGATAGTAGTAGTAGAAGAAAGTTTGCTGTTTTGCAGAAGAAAGG
GAAGTGGAAATCTGTTTCTAAAGTTATGGCTGAGAGAGGTTATCATGTTTCGCCGCAGCAATGTGAGGATAAGTTCAATG
ATTTGAATAAACGGTATAAGAAGCTTAATGATATGCTTGGTAGAGGAACATCTTGTCAAGTTGTTGAGAATCCTGCGCTT
TTGGATTCGATTGGTTACTTGAATGATAAAGAGAAGGATGATGTTAGGAAGATTATGAGTTCTAAACATCTTTTTTATGA
AGAGATGTGTTCGTATCATAATGGGAATAGGTTGCATTTGCCTCATGACCTTGCTTTGCAGCGTTCGTTACAGTTGGCGC
TTAGAAGCAGAGATGATCATGATAATGATGATTCTAGGAAACATCAAATGGAGGATCTTGATGATGAGGATCATGATGGT
GATGGTGATGAACATGATGAGTATGAGGAGCAACATTATGCGTATGGAGATTGTAGGGTAAATCATTATGGAGGTGGTGG
TGGTCCTTTGAAGAAGATAAGACCAAGCCTTAGCCATGAAGATGGAGATCATCCGAGTCATGTGAATTCTCTGGAGTGTA
ATAAAGTCTCTTTACCTCAAATACCGTTTTCTCAAGCTGATGTGAATCAAGGTGGGGCGGAGAGTGGAAGAGCAGGTTCG
GTGCAGAAGCAGTGGATGGAGTCGCGGACTCTCCAGCTAGAAGAGCAGAAGCTTCAGATCCAAGTTGAATTGCTGGAATT
GGAGAAACAGAGATTCAGGTGGCAGAGGTTTAGCAAGAAAAGGGATCAAGAACTCGAGAGAATGAGAATGGAGAATGAAA
GGATGAAACTTGAGAATGATCGGATGGGATTGGAGTTGAAACAAAGGGAATTGGGTGTTGAATTATAACGGAATTGGCTT
CACTTCTCTTGATTGGTATATAGCTTTGCTAAATGAAGTCTCATTTTCTGCTTTTGTAAGCTTGCTTTGATTGGAATGAT
CTCGAGACTTTGATGTGAGAGATCTTTGTGGTTGCATCAGTGATGAAGTTTGTGAATGTAGTGAGAAAGGAGTGGTTAAT
ATAAGCAGCTCTCTAAGGTTTGTTTTAACTCTACTTCTCAGTACTCAACTGGTTAAGGTTATTTTCATTGTTCTGCTGTA
TTGTTTTCGACATCTTAATCCAATGTGTAACAAATATCTCATTGTTAAGCCAGTTTGAGAATGAGTTGTTGCTAACTATT
TGCTTCTAAGAAGATTGAATACTTTTCGACATGGAACCTTAATACATATTTTCTATTGGACGTGGATCCAGATAACCTTT
AGCAGTTTATACTTTGGATCACATCACATCTCCTTTAGTGGAAAATGAATCAGTTTGACGATATTGAGTTTTCCTGAAGA
ATCTTGAAGCTATATTCTAAAGGTTTCTTTCAGTTTGCAGTCACATGTTCTTCTTTTGTCTCTTTCAACATAAATGTAAA
GATGTTTCTGACTAAAAAGCATGTTATGTTTGCCTGCTTTAGGTCCATCTCATGCTTGCGCTTCTTTTCAGTTTTTGTGT
TTCATTTTTTGGCTGGTTAGTGATGAGAAGCTTCTTTCCT