Basic information from miRBase |
hairpin accession number: MI0005384 |
Located between position 13846971 and 13847161 on chromosome 4 strand + |
mature miRNAs for MI0005384: |
ath-miR828 (MIMAT0004244): TCTTGCTTAAATGAGTATTCCA |
References |
[1]Rajagopalan R, Vaucheret H, Trejo J, Bartel DP, Genes Dev. 20:3407-3425(2006)., "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" |
>promoter (3kb upstream pre-miRNA, by PMRD):
ATTGAAATTGTTTATCTTCTACTTGTGGGTCACAAAAATCTCGCCGGCCCATTATATATATTATCCGGAGCTTCCAGGAG
TTGAGGTTGTGAAGCCATAGATATTGACGAAATACACTTTTTGTCTTTTTGTTGCTGTGCAACGTCATAGATCTAACTCC
GGAAGAAGAAGAAGATGAGTGACGAAACGACGTCATCTCCGTCCCCAGCTCCGGCGAAGAAGAAGCAGAATCTGGGATGG
ATGGAGTGGATGAGGGGATGGAGCAGTGTTTTCGGGGAGATTCTCTTCCAGAGGATCACAGCTTCTCATTTGGAGAATCC
TCTTCCTCTTCCTTCCGTCAACGACCTCACTTGCGTTGTCACTGGCTCCACCAGCGGCATTGGCCGTGAAACCGCGAGGT
TTGTTCTCTTCCCCGTTTCTTCCGATTTACAACCAAATTGAGTTTGATTTCGTCTAGATTGGGACTCGAATTACTGAAAA
CTTCCCTAAGCTTTTTAGCTCTTTTGCTTCTTCGGTCGCAGGCAGCTTGCAGAAGCTGGTGCTCATGTTGTGATGGCCGT
AAGGAACACAAAGGCGGCTCAGGAGCTGATACTGCAATGGCAGAACGAATGGTCTGGTAAAGGTCTCCCACTCAATATTG
AGGTAACCTTATAATGGTGATGTACTTATTACAATTCAGTAATGTGTATTACTGGGACTGAAATTAGCCAAGAATGAGAT
AAAGCGTTTTGTACAATAGAAATTTCAAATAATATGTGAACTATCTAGACTGTGGCTAAGCCAATTTCTTGTATATTAGT
TAGAGAGTTAGACTATTGGCTTGTAACGTCTAGATAGTTGATAATAATACTCTGTTTTATTTTGTAAAGGCAATGGAGAT
TGATCTACTCTCACTGGATTCTGTCGCGAGATTTGCTGAGGCTTTCAACGCTCGGTTAGGACCTTTGCATGTTCTGATTA
ACAATGCTGGGATGTTTGCTATGGGAGGTTGGTTTTATTGCCGTTTTAGCTATAAGCATTGAGTTTCCCCTTCTGTTGTT
TCCTGTATCTATTTTCATCATCTCTTTGTTATGATCTCAAAGTCATACTTGTGAACCAATCATCATCATCATCAACATTC
CAACTTGATGGACCCAATTGGTGAGAACTGGCATGTTCTTTCATAGCAACTCTGTCCAATGGGTCTCCTTTTTAAATGAT
TGGTTGTCAGATGCTACATTTTCTGCAGTATGTGTTGAGGAAAAGTAACCTTAAAATGCTCTGTTCTCTGATTTGTGCAG
AGGCGCAAAAATTCTCAGAGGAAGGATATGAGCAGCACATGCAAGTGAATCATTTAGCTCCAGCGCTGCTTTCAGTACTT
CTTTTGCCGTCTCTGATCCGAGGCTCTCCTAGCCGAATCATTAATGTGAATTCCGTTGTAAGTTCTCTATGATCACTGAT
ACTGCAGGCTCCAAGTCTGTATTCTCTAGTTTATATTCTCTTTGGTATGAGTAATCATGTTGACAGGTTGATTTGTTTGT
GTATTCTGTAACTTGAAAACCTCTGGTCTTGTCAATTGGTTGCAGAATATGTAGATAACTGATATAGATCTCTCTAAATC
ACTGAACTACATATGCATATTGTATTAACACAGTCTTGGTATAGAGAAACGATACAACCATAGCTTGTTGAAAGTTTCAA
CCCCAAATACGCTTCCATGACTGCACTATGTCATTACTCATTTCAGAAGAATTCTGTGCCTGGCTGTTTATGAAAACTGA
AACAGTTTATATTTATTGTCTTTGATTATTACTTTTTCATGCAAGATAATGGGTTGTGGGATTCACTTTTGTAGATGCAT
AGTGTCGGTTTTGTTGACCCGGATGACATGAATGTTGTTTCTGGTAGACGTAAGTACTCAAGCCTTATAGGATACTCAAG
CAGCAAGCTTGCCCAGGTGAGCTTACAGTAATGACATCTGCCGTAGTTTTCATCTGCCGTAGTTTCCATTTTCTGAAAGA
GGCTTATTTTCAGAAACTGGTGAGTTAAGTCTCGCTCTCTGATCTTCCATCTTCCAGATTATGTTTAGTAGCATTCTTTT
CAAAAAGCTTCCTCTGGAAACAGGAGTCAGCGTCGTATGTCTATCCCCTGGTGTTGTCCTAACAAATGTTGTGAGTATTA
GCTTCACTTCATTTCGTTACAAGTGCAGGATTCCTCTGTTTTCTCAGAAATTCATTGCGTTGAACTGCCTATTTCTTTCC
GAAATTTACAGGCCAGGGATCTATCCAGGATTCTTCAAGCTCTTTACGCAGTGATACCTTATTTCATATTTTCACCCCAA
GAAGGTTGTAGAAGTTCTCTATTCTCGGCCACAGATCCTCAGATTCCAGAGTACTGGGAAACACTAAAAAACGATGATTG
GCCTGTTTGCCCATTCATCTCTCAAGATTGCCGCCCTGCAAATCCTTCCGAAGAAGCACACAACACAGAAACTGCACAGA
GAGTGTGGAAAAAGACGTTAGAGCTGGTGGGTCTTCCTCTCGATGCAGTTGAGAAGCTCATAGAAGGGGAAAATATCCAA
TGCCGGTATGGAGCACAACACGAATAGTCTTTCAAAATTACCACAGGTTAAGTGACCCATTACAGATCAAAGGGTAGGTA
ATTGAGAAAATATCTTTTTTTTTTGTTTCCTTGTATTAATCTACACGATACAGTGGGGAATGAATCCCCCAGGCATGTAG
TTTGCTTGAGAATGTTTGATTGTTGGATAAAAGTCAAGCTTTAGCTACCATTCCATTGCTTTTACTTACAAGTCTTGTTC
AAGTATTTGGTTAGTGTGTCTTGGAGTTATTAAGATGTTCAGTAGTAGAGTATGGTAGCCTGGGTTGGTGGGTAGTTTCT
TGTTTGAGTTTAGGGTATTTTCGTAATTTTCTTTATTGTTTGTGGAGTCACGTTGCTCATATATAGTTATAGGGATATAT
ATCAATTAGAGTCATCATCTCTCTTACTCTCATGGTGACA