miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000330

Located between position 11333459 and 11333558 on chromosome X strand -

Overlapping with sense strand of ZK455.2 (intron 20).

(Ensemble: ZK455.2) WormBase: WormBase)

mature miRNAs for MI0000330:

cel-miR-254 (MIMAT0000310): TGCAAATCTTTCGCGACTGTAGG

You can find this miRNA in WORMBASE: (accession: ZK455/13690-13591)

References

[1]Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, Bartel DP, Genes Dev. 17:991-1008(2003)., "The microRNAs of Caenorhabditis elegans"

[2]Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP, Cell. 127:1193-1207(2006)., "Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"

[3]Kato M, de Lencastre A, Pincus Z, Slack FJ, Genome Biol. 10:R54(2009)., "Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development"

more data

Data from CoGemiR