miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0000112
Located between position 151562884 and 151562964 on chromosome X strand -
Overlapping with sense strand of GABRA3-002 (intron 1).
(Ensemble: OTTHUMT00000060922)
mature miRNAs for MI0000112:
         hsa-miR-105 (MIMAT0000102): TCAAATGCTCAGACTCCTGTGGT
         hsa-miR-105* (MIMAT0004516): ACGGATGTTTGAGCATGTGCTA
You can find this miRNA in EMBL: AF480548 (accession: AF480548)

References
[1]Mourelatos Z, Dostie J, Paushkin S, Sharma A, Charroux B, Abel L, Rappsilber J, Mann M, Dreyfuss G, Genes Dev. 16:720-728(2002)., "miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs"
[2]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"


PROMOTER INFORMATION
PROMOTER ID
LOCALIZATION
SEQUENCE
REFERENCE
SNP
TFBS
459 chrX, 151370386-151370586, - promoter sequence Marson et al.
871 chrX, 151313540-151318620, - promoter sequence UCSC


more data
Expression data from dbDEMC
Expression data from PhenomiR