miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000734

Located between position 99691616 and 99691697 on chromosome 7 strand -

Overlapping with sense strand of MCM7-014 (intron 2).

(Ensemble: OTTHUMT00000336732)

mature miRNAs for MI0000734:

hsa-miR-106b (MIMAT0000680): TAAAGTGCTGACAGTGCAGAT

hsa-miR-106b* (MIMAT0004672): CCGCACTGTGGGTACTTGCTGC

You can find this miRNA in TARGETS:PICTAR-VERT: hsa-miR-106b (accession: hsa-miR-106b)

References

[1]Houbaviy HB, Murray MF, Sharp PA, Dev Cell. 5:351-358(2003)., "Embryonic stem cell-specific MicroRNAs"

[2]Weber MJ, FEBS J. 272:59-73(2005)., "New human and mouse microRNA genes found by homology search"

[3]Cai X, Lu S, Zhang Z, Gonzalez CM, Damania B, Cullen BR, Proc Natl Acad Sci U S A. 102:5570-5575(2005)., "Kaposi's sarcoma-associated herpesvirus expresses an array of viral microRNAs in latently infected cells"

[4]Fu H, Tie Y, Xu C, Zhang Z, Zhu J, Shi Y, Jiang H, Sun Z, Zheng X, FEBS Lett. 579:3849-3854(2005)., "Identification of human fetal liver miRNAs by a novel method"

[5]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

[6]Lui WO, Pourmand N, Patterson BK, Fire A, Cancer Res. 67:6031-6043(2007)., "Patterns of known and novel small RNAs in human cervical cancer"

[7]Afanasyeva EA, Hotz-Wagenblatt A, Glatting KH, Westermann F, BMC Genomics. 9:52(2008)., "New miRNAs cloned from neuroblastoma"

PROMOTER INFORMATION

PROMOTER ID

LOCALIZATION

SEQUENCE

REFERENCE

SNP

TFBS

401

chr7, 99537263-99537463, -

promoter sequence