miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000786

Located between position 149112388 and 149112453 on chromosome 5 strand +

Overlapping with sense strand of PPARGC1B-001 (intron 1).

(Ensemble: OTTHUMT00000252334)

mature miRNAs for MI0000786:

hsa-miR-378* (MIMAT0000731): CTCCTGACTCCAGGTCCTGTGT

hsa-miR-378 (MIMAT0000732): ACTGGACTTGGAGTCAGAAGG

You can find this miRNA in TARGETS:PICTAR-VERT: hsa-miR-378 (accession: hsa-miR-378)

References

[1]Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M, Nature. 432:226-230(2004)., "A pancreatic islet-specific microRNA regulates insulin secretion"

[2]Kasashima K, Nakamura Y, Kozu T, Biochem Biophys Res Commun. 322:403-410(2004)., "Altered expression profiles of microRNAs during TPA-induced differentiation of HL-60 cells"

[3]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

PROMOTER INFORMATION

PROMOTER ID

LOCALIZATION

SEQUENCE

REFERENCE

SNP

TFBS

352

chr5, 149089947-149090147, +

promoter sequence

Marson et al.