miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0003123
Located between position 176998499 and 176998581 on chromosome 1 strand -
Overlapping with sense strand of ASTN1-005 (intron 3).
(Ensemble: OTTHUMT00000084826)
mature miRNAs for MI0003123:
         hsa-miR-488* (MIMAT0002804): CCCAGATAATGGCACTCTCAA
         hsa-miR-488 (MIMAT0004763): TTGAAAGGCTATTTCTTGGTC
You can find this miRNA in HGNC: MIR488 (accession: 32073)

References
[1]Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z, Nat Genet. 37:766-770(2005)., "Identification of hundreds of conserved and nonconserved human microRNAs"
[2]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"


PROMOTER INFORMATION
PROMOTER ID
LOCALIZATION
SEQUENCE
REFERENCE
SNP
TFBS
122 chr1, 175400547-175400747, - promoter sequence Marson et al.
554 chr1, 175265122-175270204, - promoter sequence UCSC


more data
Expression data from dbDEMC
Expression data from PhenomiR