miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0003124

Located between position 93113248 and 93113331 on chromosome 7 strand -

Overlapping with sense strand of CALCR-005 (intron 3).

(Ensemble: OTTHUMT00000341744)

mature miRNAs for MI0003124:

hsa-miR-489 (MIMAT0002805): GTGACATCACATATACGGCAGC

You can find this miRNA in EMBL: AY882328 (accession: AY882328)

References

[1]Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z, Nat Genet. 37:766-770(2005)., "Identification of hundreds of conserved and nonconserved human microRNAs"

[2]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

PROMOTER INFORMATION

PROMOTER ID

LOCALIZATION

SEQUENCE

REFERENCE

SNP

TFBS

399

chr7, 93041872-93042072, -

promoter sequence

Marson et al.