miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0003183
Located between position 33578179 and 33578300 on chromosome 20 strand +
Overlapping with sense strand of MYH7B-001 (intron 20).
(Ensemble: OTTHUMT00000078833)
mature miRNAs for MI0003183:
         hsa-miR-499-5p (MIMAT0002870): TTAAGACTTGCAGTGATGTTT
         hsa-miR-499-3p (MIMAT0004772): AACATCACAGCAAGTCTGTGCT
You can find this miRNA in HGNC: MIR499 (accession: 32133)

References
[1]Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z, Nat Genet. 37:766-770(2005)., "Identification of hundreds of conserved and nonconserved human microRNAs"
[2]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"


PROMOTER INFORMATION
PROMOTER ID
LOCALIZATION
SEQUENCE
REFERENCE
SNP
TFBS
291 chr20, 33026766-33026966, + promoter sequence Marson et al.
486 chr20, 33028861-33029109, + promoter sequence Fujita et al.
1199 chr20, 33036840-33041961, + promoter sequence UCSC


more data
Expression data from PhenomiR
Polymorphism data from Patrocles