Basic information from miRBase |
hairpin accession number: MI0001090 |
Located between position 18288106 and 18288211 on chromosome 09 strand - |
mature miRNAs for MI0001090: |
osa-miR156k (MIMAT0001020): TGACAGAAGAGAGAGAGCACA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GCTCGCGTGCGCGCGCTGAAGAGGGTTGCTATAACAAGAAAGCTGAAACGTCGGCGCGGTTTAAACAATTCGGGATCGCC
ATGGCTGGATTGGAGCTAAGCAAATCGACCCATCGACACCTGGATGCGTGGGCGTGGCCTCGGAAAGGAGGGGAAGTAGA
AGTAGAGAGGCGAGGATGGGATTAGCGAATCTTACGCCCCCGGAGCGGTTGCGGTTGCCGGTTGGGATCCTCGGTTGAAG
GATCCGGTCCAACACGAGATCCCGCGAGGCGGCGCCGCGGCGCTGCTTGAGTCTCTGGAGGCGGAGACGGCGGCCGGAGT
TTGGGAGGGAGATCGCGCCGCGCTTCTCGCATTTGGCTGGTTGTTGGCTTGTTGCTGCGTTGCGCGTTGCCATTCAACTT
ACCCAGAAAACGGAAAATATGCCACTCCAGAAAATTGCAAAGGATAAAATGTCACCCACTAGAGTACAAAGGATAAAATA
CCACTCAATAGGTTATCATCAGTATACTTTGCCATTTTGGGTGGTTTTGAGACCAAAATACCCCACCGTGGAGAGAGAGG
AAGGGAAAGAGGAAAGACGGCGGCCGTGCTCGTCGCCAGCGGGCAGCAAGCACGCGGGGGTGGGCGGCGAGAAGGGGAGG
AGGACAGTGCCGCTGAAGGGGGGAGGACAGCGCCGGCTCCATCGGGAGAGGGCGTCGACGTGGGGAAGGAGGACGGAGCT
GGCACGTCGCTGACGAGAGGAGGAGGACGAGGTGATGAGGAGCAAGCGAGCGGCGGCGGTGGCACCCACGCGCGCTTGCC
GCCGGGGGAGGACGAGGAGGCGATGCAGGGGAAGGAGGAGGAAGAGGCGACGCAGGAGAAGGAGGACGACGTTGGAGCAG
CAGCGGCCGGGCGGCGACGGGGACGACGGGTCCGTCTGAGGCTTCACCAATGTCGGCTCTTCCTCCGCCCCGTCGTCCTT
GCCGCCCTGTCCTCTTCCCCCGTCATCCCCGCGGTCCGTCGCCACCACCGCCGCCCAGCGAGTCCTCCTGCGCCGCCCGG
CCGGCCCTCCCCGGTGCTCCCCTTTCCTCTCTCTCCAGGGATATTTTGGGCATAAAAGTCTCCAAAGTGGCATTTTATCC
GAACCGATGTTAGAGAGTGGCATATCATCCGTTTTCTCTCAACTTACCCCTCTTTTGAAAGGGTTAATTTGATCCGTTCC
ATTGCAAATATGTCTATTCAGATAAATGTCATTATAATTCGTCTATTCGTAGCTGTGCCACTCAAATTTTACAAAATTGG
AGCCATGCTATCACTGTCATGTTTTACATCATCTTCCTCATCTACATGTGGGACCCACTAGTCAGATTCATCTTCTTCCT
CCATCCTCCCCTCTTCTCTCTTTTTTTTCCATCCCTCTCTACCACTTCAATCTCAGCCTCATCAGCAACAGGTTGCACCA
CTTCCTCCATCCTCCCGCAGGCCGTTGGCGCCAGCACCATGCCGGAGCAAGCCGTGACGGAGGTCGGAGGCATGGACTTC
CCCGGCGGCGAGGTCGGAGGCGTGGCGCGTGCGGCCGCGAGTGGGGGAGGTGTGGCGTCTGTGGCCGCAAGGGCGGAGGC
GAGATCGTCCGTGTCGGTGAGGGCAGAGGTGTGGACTCTCGTGACGGCGAGGGAGGACGCGTGGACTCCCATGGCGACGA
GGGTGGACGAGTACTCCACAGCGGCAACATCGGAGACGTGGACGCCTGCGGTCACGAGGGCGGAGGCGAAGTCATCCGTG
GCGATGAGGGGTGGAGGTGTGGATTCCTGTGACGGCGCTGTCGACGGGGGATACCTGTAGACCGGATATAAAGGGTATTG
GGGTACGCTGGTATGAGGATCTACGTAGTACGACATCAAGCAAACAGGAAACAGGGATTATACTGGTTCAGGCCCCTTGG
TAGGTAATAGCCATAATCCAGTTGATATGGGATTATATGATAGAAACCACAGATTACAAAGGGAATAGCGGAACTCGACG
ATACCGTCGGGATCGTAGTCGAGTTGATCCGACTAGATCTCCCGGCGACTTGGCTCCAACAAGCTCCAGCTTCGTAGGCT
GTGGTGGATGTGTTGGCTCTGAGATTCGATGCCTTAGGTCCTCCCGGGGGGTCCCTTTTATACCACAGGTCAACTGGTCT
CCAAGTAGGACTCGGAGACATCAAACCCGACACGATACAATGACGACCCAGTTCTATCTGAGTAGGACTCTTTCCATCTA
TAGACCCCGTGATGGACTTCCTTAACTTATGCTGAGAACGTCCGTATACGCGCAAGCATACCATATCGATATGTGACGTA
TATCGAGGGGTAGAGGGTATACCTTACCCGTAACCCTGACAGTAGCTCCCGACTTCTGCTTAAATGAACTTGTGAGACCG
ATCGCGGCTTCTGATGTTGTCGTTGTTCTCGGTGTGAAGACCGAGAGACAAGGAGTGATCGACAACGTCGGGTGAAGCTC
AACGGTCATGAGTGAATTTAAACTGAAGTCCGAAAAACTGTCGCATGTAACGGACCCCGAAATTTCCGGCGGCCATCTCT
CTCCTTTCCTTGGAATTCGCACCGTCGGAAGTGCGTCTATTTAAGGGAGTTTTGGGGATCCCATTTGAAGTACGCCTGTT
GAAAACACTCTCCAGCTTCCAAGCGTCCCTCGTCTTCTTCGCTCCCGCAAAAAACCCTAGCTAGCTCATCTCGATCCTTT
CTTCGGCGATCCCCAGCAGTGATGGATCTCGACAAGTCAACCTCCACCGGTGCATCGCTGAAGAAACTGCAGGAGGATGG
TGCCCTTCCCGGTCGTGGGACCGCGGAGAGGGAAGTAGGAGGTACTGAACCCCAGCCTGTCCTGGGTTGCATGGTTGCGA
TCGAGGACTTTATTCTCTGTGGTTTTCTTCCTCCGCCTTCTGAATTTCTTCTCTTGGTCTTGAATTTCCATGGTCTTTCC
TTGCTCCATTTGAACCCTAATTCCATCGCCTTCCTAAATA