miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001090
Located between position 18288106 and 18288211 on chromosome 09 strand -
mature miRNAs for MI0001090:
         osa-miR156k (MIMAT0001020): TGACAGAAGAGAGAGAGCACA

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
GCTCGCGTGCGCGCGCTGAAGAGGGTTGCTATAACAAGAAAGCTGAAACGTCGGCGCGGTTTAAACAATTCGGGATCGCC
ATGGCTGGATTGGAGCTAAGCAAATCGACCCATCGACACCTGGATGCGTGGGCGTGGCCTCGGAAAGGAGGGGAAGTAGA
AGTAGAGAGGCGAGGATGGGATTAGCGAATCTTACGCCCCCGGAGCGGTTGCGGTTGCCGGTTGGGATCCTCGGTTGAAG
GATCCGGTCCAACACGAGATCCCGCGAGGCGGCGCCGCGGCGCTGCTTGAGTCTCTGGAGGCGGAGACGGCGGCCGGAGT
TTGGGAGGGAGATCGCGCCGCGCTTCTCGCATTTGGCTGGTTGTTGGCTTGTTGCTGCGTTGCGCGTTGCCATTCAACTT
ACCCAGAAAACGGAAAATATGCCACTCCAGAAAATTGCAAAGGATAAAATGTCACCCACTAGAGTACAAAGGATAAAATA
CCACTCAATAGGTTATCATCAGTATACTTTGCCATTTTGGGTGGTTTTGAGACCAAAATACCCCACCGTGGAGAGAGAGG
AAGGGAAAGAGGAAAGACGGCGGCCGTGCTCGTCGCCAGCGGGCAGCAAGCACGCGGGGGTGGGCGGCGAGAAGGGGAGG
AGGACAGTGCCGCTGAAGGGGGGAGGACAGCGCCGGCTCCATCGGGAGAGGGCGTCGACGTGGGGAAGGAGGACGGAGCT
GGCACGTCGCTGACGAGAGGAGGAGGACGAGGTGATGAGGAGCAAGCGAGCGGCGGCGGTGGCACCCACGCGCGCTTGCC
GCCGGGGGAGGACGAGGAGGCGATGCAGGGGAAGGAGGAGGAAGAGGCGACGCAGGAGAAGGAGGACGACGTTGGAGCAG
CAGCGGCCGGGCGGCGACGGGGACGACGGGTCCGTCTGAGGCTTCACCAATGTCGGCTCTTCCTCCGCCCCGTCGTCCTT
GCCGCCCTGTCCTCTTCCCCCGTCATCCCCGCGGTCCGTCGCCACCACCGCCGCCCAGCGAGTCCTCCTGCGCCGCCCGG
CCGGCCCTCCCCGGTGCTCCCCTTTCCTCTCTCTCCAGGGATATTTTGGGCATAAAAGTCTCCAAAGTGGCATTTTATCC
GAACCGATGTTAGAGAGTGGCATATCATCCGTTTTCTCTCAACTTACCCCTCTTTTGAAAGGGTTAATTTGATCCGTTCC
ATTGCAAATATGTCTATTCAGATAAATGTCATTATAATTCGTCTATTCGTAGCTGTGCCACTCAAATTTTACAAAATTGG
AGCCATGCTATCACTGTCATGTTTTACATCATCTTCCTCATCTACATGTGGGACCCACTAGTCAGATTCATCTTCTTCCT
CCATCCTCCCCTCTTCTCTCTTTTTTTTCCATCCCTCTCTACCACTTCAATCTCAGCCTCATCAGCAACAGGTTGCACCA
CTTCCTCCATCCTCCCGCAGGCCGTTGGCGCCAGCACCATGCCGGAGCAAGCCGTGACGGAGGTCGGAGGCATGGACTTC
CCCGGCGGCGAGGTCGGAGGCGTGGCGCGTGCGGCCGCGAGTGGGGGAGGTGTGGCGTCTGTGGCCGCAAGGGCGGAGGC
GAGATCGTCCGTGTCGGTGAGGGCAGAGGTGTGGACTCTCGTGACGGCGAGGGAGGACGCGTGGACTCCCATGGCGACGA
GGGTGGACGAGTACTCCACAGCGGCAACATCGGAGACGTGGACGCCTGCGGTCACGAGGGCGGAGGCGAAGTCATCCGTG
GCGATGAGGGGTGGAGGTGTGGATTCCTGTGACGGCGCTGTCGACGGGGGATACCTGTAGACCGGATATAAAGGGTATTG
GGGTACGCTGGTATGAGGATCTACGTAGTACGACATCAAGCAAACAGGAAACAGGGATTATACTGGTTCAGGCCCCTTGG
TAGGTAATAGCCATAATCCAGTTGATATGGGATTATATGATAGAAACCACAGATTACAAAGGGAATAGCGGAACTCGACG
ATACCGTCGGGATCGTAGTCGAGTTGATCCGACTAGATCTCCCGGCGACTTGGCTCCAACAAGCTCCAGCTTCGTAGGCT
GTGGTGGATGTGTTGGCTCTGAGATTCGATGCCTTAGGTCCTCCCGGGGGGTCCCTTTTATACCACAGGTCAACTGGTCT
CCAAGTAGGACTCGGAGACATCAAACCCGACACGATACAATGACGACCCAGTTCTATCTGAGTAGGACTCTTTCCATCTA
TAGACCCCGTGATGGACTTCCTTAACTTATGCTGAGAACGTCCGTATACGCGCAAGCATACCATATCGATATGTGACGTA
TATCGAGGGGTAGAGGGTATACCTTACCCGTAACCCTGACAGTAGCTCCCGACTTCTGCTTAAATGAACTTGTGAGACCG
ATCGCGGCTTCTGATGTTGTCGTTGTTCTCGGTGTGAAGACCGAGAGACAAGGAGTGATCGACAACGTCGGGTGAAGCTC
AACGGTCATGAGTGAATTTAAACTGAAGTCCGAAAAACTGTCGCATGTAACGGACCCCGAAATTTCCGGCGGCCATCTCT
CTCCTTTCCTTGGAATTCGCACCGTCGGAAGTGCGTCTATTTAAGGGAGTTTTGGGGATCCCATTTGAAGTACGCCTGTT
GAAAACACTCTCCAGCTTCCAAGCGTCCCTCGTCTTCTTCGCTCCCGCAAAAAACCCTAGCTAGCTCATCTCGATCCTTT
CTTCGGCGATCCCCAGCAGTGATGGATCTCGACAAGTCAACCTCCACCGGTGCATCGCTGAAGAAACTGCAGGAGGATGG
TGCCCTTCCCGGTCGTGGGACCGCGGAGAGGGAAGTAGGAGGTACTGAACCCCAGCCTGTCCTGGGTTGCATGGTTGCGA
TCGAGGACTTTATTCTCTGTGGTTTTCTTCCTCCGCCTTCTGAATTTCTTCTCTTGGTCTTGAATTTCCATGGTCTTTCC
TTGCTCCATTTGAACCCTAATTCCATCGCCTTCCTAAATA