Basic information from miRBase |
hairpin accession number: MI0001091 |
Located between position 5230587 and 5230742 on chromosome 05 strand + |
mature miRNAs for MI0001091: |
osa-miR156l (MIMAT0001021): CGACAGAAGAGAGTGAGCATA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TGCTCTATCTAAAGTGAGAGGAGATGAGGAGCAATAAATAAAGCAGAGGAGAGGAAGAGAGAGGAACCATCGGCCCTGAC
CTCGCCATGCGCTGCCGTCGGTTTGAGTAGCTGGGGGAGAGGAAGAGAGGGGAACCGTGGGCCCCAACCTCCCAGTGCAC
CATCGACGGAGTGAGTTGCAGATGGAGGAGCTGCCAGAGTGAGTAGCACTAGTCACCAGTGGGAAGAGAGGAGAGAGAAG
GAAGGAAAAAAAGGAAAAGAAAGAAGAAAGGGTAAATTGGTCTAAAAATTTTAATGAATGCATCGAAGGGGTAAGTAGTG
GCATATCTCAAATTTCTGTAAAGTTGTAATGGCATGATTTGAAATGGGTGAATAGTAATGGTATTTTTTAAAAATATGCA
AATTTGGAATGGCATGTATCCAATTAACCTTTTTGAGATAATGATAATACTGATAGTTATGGATGAACCTAAAAACTTTT
GATAATGTATAATATATTGACATCTACCAAACTATCACGCACAAAAAATCTCATGTCAAAACTCGACCTACAAACCAAGA
AAAAGAAAAGGAGAAATATAGTGGTGAATAATGTAATTAAGTATTGTTCACAGTTTAGATTCGTCTTTTTTTCTCAATAC
GAGAGATGATTAATTTAGACTTTGAATTTCCTTGATTATCATATGTTACATAGTAACAATGTCATCTTTTTATAAGTTTT
TTTTATTAATTTTCGAAAGTATTTTGAGAAAACAAGGGGTCATCCCCTTAAGATGTGGAAAACACTTTTGATCCCCATGA
CAGCATGTACACTCATAATTATTAATTCTTTTCAAGAGAACATAGCTAAATCGATTAATTCCTTAGAAAGTAAAGTTTAT
TGGGGGACTCAAAATGGTTTTAGTACTTATAAACACCCTGCATCAATTATAAATACCAAAATTATTTACTAGTAAATACT
CTCAATTAAGTGAGAATCTTTCCAGAATTTACATATTCAAAACTCTTCAAGTGTTTAGGTACCAAAACCATTCGAATTTT
GCACCACCATAAAAAACTGAATGATTTCAATAGTTTTGGATTGAAAACCAAACTTGCGTGACAATCCAAAGTTGTAAAAT
GGACCTTGTTTTTTTTCTCAAGTTGCTAGTAGCATATAAATTTTTGAGGATATATCGTTTCCCTCAAGAATGTGTTGACA
ACCAACTACTAAGGAAAAATGAATTCGGTGTGAAGTGTGTTGTGAACCATGGGTGTTAAAAAGCAGTAATAATGAACAAT
AAAATTTATCATATAGAGGAGAAACTGTTGACGTTACAACCTTCAACTTTTACCAAAGTCCTAAACTGCTACATATTGTT
TCACAGTTGCCAAATTTATTTAGGTTATAGATAGTCCAAAAGATAGTGATAATATTTTAAGAATATTTGAAGTAATTTAA
AAAATTCAAGAAATGTTTTAGCGCTGGCTTACATCAATTCAAATACTCGATGTGCTGTACTTCTCCCTACATTGCCACTT
GGTCGTCATTTCACTGAAAACACTCTTTATCTAGACAATGGTTTAGAAGTTCACTGTTGTTTTGCACACATTTATATAAA
AGTTTAGTGTTGTATAGAATGGACATTTTCCTAACACATACATAATAGTTGACAACTTCAATAATGTCATAATAACTATT
CCAAAATTTACCATTATTCGCTAATTCATTAGGAGGAGTAGCTAATGGTTGTTAAAGCTCTCTGTTTTCCCACGACACAA
TAGAGTGGGGACTAGTATATATGTGTTTATCACACAAGATGCAACTGATGACGATGGCATAACTAATTTAGACAAATAGT
TTCCTCTAGGAAAAAGTCCGAATCCCCACCCCTCCTAAAAAAAACACTATAGTTGTCAATCGAATTACCCAACCCACAAA
AAAATTCAAAAAACAGACAATTTAAACCCTCAACTCTTTAATCCGGACAAATTACACCCGAGCACTATTTTGGGCTAGGC
TGGCTGAAATGACATTTCTAAAGTGGCTAAAAAAATATTTAAAAAATACATGGCCAACTTGTCAGTGCTCCAGCACTCCT
CTCCCCTTCTCTTCTGCCTCCTCCCCCCCCCTCAATCTCTCTCTCTCTCTCTACCTTGAACCGAGCACAGAGGAGGTGGA
GGCAGCGGCGGTGGTGTGACAACGACAGAGACTAGACCCCCGGGGCGCTAGTGGTGGAGCGTGATCAGCCGGAGAAGCCC
AGGGAAGCGGCGGTGCACGGTCGGCCAAAGAATCCCAGGATGACAGCGGCGGCGGCCTCAAATCCAGAGGAAAGGCGAGA
GCGACGGGGCCAAGGAGGCGTCAATGGTGGAGGCAGTCGAAGAAGTCCATGGCAGCGGCAGATACTGGTCCCCCACGGCG
CCGACAACGGAGCGTGGTAGGACAGAGAAGCCCAGGGCCACATCTGCTTATCCCTGCTCGTGCTACGGATGGAGGAACTG
GAACGGCGTTGGCGGTGTCCTGGGGAGGTGGTGGTGGAGATGTTGTGCAGGTTAGCACCGGGGCCGCGTGCCCACGTCCG
CTATTGTAAGATGCGGCTGGTGGGCCACAAGTGCCCACGTTGTGCATGGCATGCAGCCGGTGACCAGCCTGTCGGCCTGC
TACCTCGCTGTAGCGTCTCCCCACCGATGCCGCAGCTTGGTCTCCACACCAATCCCTTCTTCGCGTGGCGTGGTTCTCTC
CTCCACAAGCATGTCAATCGGCAAGTAGAAGTCGTCGACCAGAGGAGGTCGAGTCACAAGTGCGTCTTGGTTCACCGGTC
ACTGCCTTGTAGTCGTTCATCATCGCTGCTGCAGCCTCCTCACCGTTGCCTCCGCTCGAGCTTCATCTCCGCGTGAGCTA
TGCAGAGCCGGAGTATGCGAGGTGGATGCTTTCCCGCTCTCCAAGCTCCGTCGTCCATCGTCCACCAGGGGCAGCCACAG
CTGGCGAGCACCTCGCCTCCGCGGGCATAGCTCTCTCCTC