Basic information from miRBase |
hairpin accession number: MI0001094 |
Located between position 6555048 and 6555244 on chromosome 01 strand - |
mature miRNAs for MI0001094: |
osa-miR159c (MIMAT0001024): ATTGGATTGAAGGGAGCTCCA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TGTCAGTGGATTAATTGAGATTGCAAAGCATATGAATTTGGGATTACAAATCGAAAAGATCTTGGGAGTTAAAGCTACCA
AGTATATAGGCACGCATATTATCTGGAAGTGTCTCACCATTTGGTTGGAATATGTTTCCATTTGCAAATGGCAAGTCCAT
TTGCATATATGCATGCCTCGCAGCAATAACTAGGTACTGTATAATGGAAATAACTGAATGGATATGGAAACTTCACAGCA
ATGTTAACAAATATTGTGAGAATCATCTCTAAAAATGAAACATATTTAGATGGAAATATTTCGAAGATAATACTAAAGGT
TACGGAATCATCGATCTTTGCAAATATACTCATGCCAAGTTATATCACCATAATTACACAGACTTACTAATATCCTCATG
CCAAGATATCACTTTCCAAAAACTGCTGTATAAAGAACTATAAGAGATTTGCAAAAATATTTCAATTAGCAACAAGGCTT
GCCGCCAGCCTCACCTGCCATTCATGCATGATGCATATACCAAAGTAAACATCACAAGGGCCAAGGGGAAAAAAAGGCAA
GGTAAAAACAAATGGCAAGTTCAGGTAAAAAAGAAAAGGCAAGTTCTCTGTCCATATATTGTTAGGACCCTGCATCTGAT
CCGCCCCTGAGTTATATATAAACCCACCAACCCGTATGCAATCGTTGTACTCAGAAGTCAGAAATCTTGCGTTCCTAGTC
TAGAAACCCATAGCATACAAGGATTGATATAGCCAGCTTTGTCACCTCTTTTTTCATATACATTGTTTTTGTTGCGTTTG
ATACATAAGTTGAAGGGGAGAAGAGGAGGAAGAGGAGCTCCTTTCGATCCAATTCAGGAGAGGAAGTGGTAGGATGCAGC
TGCCGATTCATGGATACCTCTGGAGTGCATGGCAGCAATGCTGTAGGCCTGCACTTGCATGGGTTTGCATGACCCGGGAG
ATGAACCCACCATTGTCTTCCTCTATTGATTGGATTGAAGGGAGCTCCACATCTCTCTCGTCATGGCATGCGTTTTTGTA
GCTTATTCTTACTTAATTTTGGGTTTTCTCACTGCAGGAATATACAATGACGGGAAAGCAGAAGATAGAAGAGGTGACTG
TCGGAGGACCGGAGGCAGATTGATAAGATTCTTATCATAAGAGTCAGTAGCTATCAATGACCAGCAAATTAAAGTATTAA
ACTACTTGTACACCGTCTTTTTTTTCTTCTTCTTTCCTTGTCCTGGTCAAGGAACCGTATAGTGACAAATTTCGTTCTGG
TTCTCGACAGTAATAATGAAAGACCAAGCATTTTTCATCTCCTTTTTAATATTTGATATCACTCTAATGTGTCTAAGGAC
AAATTTCGTTCTGGTTTTCCACAGTAATAATGAAAGACCATGCACTTTTCATCTCCTCTTTACTCTTTGATATCACTCTA
ATGTGTCTGTATACATTTTGTACTGTATTGATGATTAATTTGTCTCCCAAGTATGAACGACTTGAGAAATGAAACCAAGA
ATAGGCTAGGCACGCATGTAGCAGGGTAATATAGTTTCTTATGGAGAAGTAAAAGTGAAAACATTGTAGAACTGATTTAC
TTGCCATGGTTTACCTTGGCGAAACGAACACTCGAAGCAAGAATCTGGACTGGTACACTGCCGGGCAGGGAGCCAGCCCT
GCTTCGGCGGCAGGTGGCGGCGCCGCCGCGGGGGTCGCGGTTGGCCTGCGCCGCCTCCACCCTTCGCTGATCGAGCCGGC
CAGGCGACGGCGAGGTGAGGCGAGGAACGGCGGCGGCGCAAGGAGGCAGCCCTAGCGCCTCTGATTCTGCTTTCTTCCCT
CGTATTGGGCTTGCTCCTTGGGCTGAACTACTGGGCCGAGCTAGGCCGGCGTCCTCCCTCGCTTGGGCCCTCCGGCCTTG
CAGCTGGTCCGTGGGCCGCTGCCCGTTCTTCACTCGATAGTAGCGTAGTAAGTTTTTTTTTTTTTAAATTTTTTTTATTA
AAAGTTTTACAAAAATAATTTTTCATTTTGAAAATTGACAGAAGTGGTCGCCTACCGCCCTCTGGGAGGACGATTTTTAA
AAATCGTCATCCCAGAGGGTGGCGAAAGTGACGTGGCAGACGGCCGTTCGCTCTCGGGCGACGGCCGTCAACGAAATTTG
TAGGCGGCCCCCTTGCCGCCCTCCGCTACGGCGATTTTGTACTGTGCGGGGGGCCGCCTGCAAATGGGCGGCGGGGGGCC
TAGAATTTTGCAGGCGGCCCCCTTGCCGCTCTGGGGGAGGGCGATTTTATACTGTGCTTTATATTTTTGTATAAATATCA
ATAGTTATCAAATCTTTTTATATTGAAAACTATACAAGATTAAAATCTCCAAGACTGGTAAAATACAATTTTATTATTTT
TTAGGGCCTATTTGGAATGTTACCGTACAAATATTTTGTTAGTGCCAAAATATAAGCAAGTTTTGGCACTACCAAATATT
TGGTAAGGTAAAATTGCATTTGATCATATTTGGTTTGCTGCCAAAATGTAAAATTGTAGTGAAGAATGTTCTACATAATC
TTAAATCTAGATTACGTATTACCAATGAATAGGCTTCAATCGAAATCAAACACAAGTACTATTCAAATTACCAAAATATT
GGTAGGGCATGTTTTTGGTAGCAATCCAAATAGGCCCTTAGTCTTACGCATACAAAAAATCACCACCATAATTAAACATT
GTAATGATAAGATAGATAAGAAGTGCCATCGATACACGGTACAAATTTGTCGATCCCGACGAATCAAGCATGCGGTAACC
TATCGGCCCCTTCTAGGTCGGTCAGAATGCATTGCATTCTCGTGGTCCTTCAATCGTTGATACTCTACTTGTGTTTCTGA
CTCTGTTATCTTCTGGCCATGATATGATGGAGTGACATTGTCGATCCATCGAGTAAATCCACCCATCCTTGGATTGCCCT
GTAAAAATAGTAATGTTATTCAGTTTGGGTAGTAATTTTG