Basic information from miRBase |
hairpin accession number: MI0001096 |
Located between position 9759684 and 9759874 on chromosome 01 strand - |
mature miRNAs for MI0001096: |
osa-miR159e (MIMAT0001026): ATTGGATTGAAGGGAGCTCCT |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
AAACGAAAAGGCTGATTGTTTGTTCAGTCTTGAACTTTTCGGTTTATAAGCTGGTTTACAATCCTAAACAAAGATAGATT
AAATTTAAACTAACATATAGGAGGCTCGTTGTAACCTGAGCTACCACCAAGTATATGCACGCAGATTATCTGGAAATGTC
TCACCATTTGGTGGGAATTGTTTCCTTTTGCATATTTGCATGCCTCACAAAACATCAAGTCAATATACAAAGAAGCGTGA
ATCAAGCAGAAATAGCTGAATAAATGAATAATGGATATGGAAACTTCACGACAATGTTAACAAATACTGTGAGAAAACTG
AGAATCATGTGTAAAAAGGAAACAAATTTGCACGTATGATATTCTTTTCGCGATTTTCTTTTTATGACAAGTGCTCGAAC
ACACGAGGATTCGAGAACGAGATCGACGCTTCCAACAGCCAAATCCGGCCATCAAATTGCTTTCTATATATACAACATTA
AGAGATTCGCGAAAATATTTTTAAATAAGCTAGCAACAAAACCAGCCGCCAGAGCCTCACTTGCCATGCATGGATGATAA
ATACCGATTAAAAATCACGAGGCCAATCGAAAAAAAAGGGCAAAGGTCAAGAAAGAAATTAATGGCAAGTCATCAATCCA
AGATTAGCCCGACTTCTATATAAATCACCAACCCCTAAGCAATCGTCGTACTCATCAGAACTCATGTGTTCCTAGGCTAG
AAGAAACCTATATCACACCCCCCCCCCTTTTTTTTTTGTTGCGTTTGATAAGTAGAAGATTGACGATATAATATTGGTGT
GATGTGAAGGGGATCAGAAGATGATGAAGAAGAAGAGCTCCCTTTCGATCCAATTCAGGAGAGGAAGTGGTAGGATGCAG
CTGCCGGTTCATGGATACCTCTGGAGTGCAGGGCAAATAGTCCTACCCTTTCATGGGTTTGCATGACTCGGGAGATGAAC
CCGCCATTGTCTTCCTCTATTGATTGGATTGAAGGGAGCTCCTCTAGCTACATCTCTGTCATCTCTCTCTCTCTCTCTCT
TTGATATTACTATATCATCATGCATGGTATGTGTATTAACGTTGTTTGCAGCTAGCTTCTTGTTCTTGATTAATTTGGGG
TTTTTTTTATCACCACAGGAGTGAGTATACAATGACAGGAAAGCAGAAGAAGAGGTATAAATGTCACATCTTGTTTTAGG
TTAGTTTTTATGAGATAGAAGGAGTATATATTAGTTGTCGGAGGGCCGGAGGCAGATTGTCCAAGAGCCATGATTATCAA
TTACGAGAAAATAAACTAGCATGTACACGGTACTTTTGTTTCTTTTTCTAATTTACTCATTCTGGTCAAGGAACAATATA
ATGTATATATAAGGACATGTTGCGTTCTGGTTTTCTGCAGTAATGAACGATCATTTGTTTTTCTTCTCCTTTTTAAGCTT
TGATATCAATCTAAATATCTAACGTTTGAATATACATTTGTTCTTGAAAAAAAGTTTCCCTGTTATATAGCCCTGTTTAT
GTCTTTATTTTTGTCCTTTGGATTGTATATATATTAATTCTCACTCTATATTTAGGCGTTGTTCAGATTGATGCCAAAAA
TGATATGGTTGAAAATATCATGAATCTGAACTGCCTCGAGGTTATTAAATATTTAGGCGTTCGTGCCTTAGTACCTCGTA
AACCCTATTCTTAATTTATTTATCACTTTTTTATTTTTAGTGCGCATGAAAATAGATGGCATGGTACTTTATTTAGATCA
ACATGATTTTTAAAATATTGATACAACACTTAGTTTAATTATCATAAATTGATTCTAAAATTGTATATACATTCAAAAGG
CCTATTGATGGATTTAAAAACAGTAGCTTGTAGAGACCTAAAGATTTGCAATCATCTCAAGGAAATCCGTTGTATTTTTA
TAGCATTCGCTGTATTTTTTAAAAGAACAGAAATCTTATTTTTATTTTTCTGTCAACTGTTTATTTATGTGGGAGCGTAA
AATCGTAATTGATCGTTACCAGCCACGAAGCACCAAGGCCATAACTAGGTGAATATCACGTTTAACGCTGAGGTTACCTT
GTAAATTTAATTTACTAAAGGACCAAAATACAAAATTGCAGTGACATCCTTATCGTCTACTCCCTGCTAGGTTTTTCAAC
TCGACATCATATCACCCGCTATTTACATGTAACTCGAATAGCTAAAAAAAATTGGAAAAAGAATAGTAACATCAATTAGG
ATGATATGAATCCATAAACAAAAATACAAGACTAAATTTAATTTAGAACCAGAGAAAAAATAATAAAATCAAGGAGTGAA
TAGTACCTACACAACGTAGATAAAATTCGTTATTTTTCTTTCTTCATGTGTAGATTGAATTTAGATTTAATGTTTATATA
GTGTCTTATATTATCAAATATCTTATTAAATTTTATAAATATTTTAAATAACTATTTAAACCACATAAATATATATGAAC
ACCGTAGCATATAGGTGTAGAAAATACTTTTCCCCTGCCCATCTCCTCTCTCGTCTTCTCACGGAGGGCCGGCGGGGCAT
CCGGAGATCTCTTCCCCAATCTCTCTTGCCCACTCATCACTCTCTCCCAGCTCATCAATATGTTTGAGAGAGGATAGGCG
GTAGCCATGCTTTTTTTTTTTCCTTTCTTTTTTTTTATCTTTTCTTTTTCACACTTTAATCTTCATTATTTTCTTCACTT
TAAATCAATTGAACAAGTTCCAACTTTAACGTTTCTTCTTATATATTCACCAACTACAGTTCTACATCCTTCATCCTTCA
TTTATCAAATTCAACAATGAAAATCATCTCAGTTTGATCCAACGTCCCAGGCTGTCTACACTGGTTCCTCCCAAAATCGC
AGAGTGCAGTTCTACATCCTTCATTTATCAAATTCAACGATGGAAATCATCTCAGTTTGATCCAACGTCCCAGACTGTCT
ACGCCGGTTCCTCTCCCAAAATCGCAGTGTGTCATTCATG