miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001096
Located between position 9759684 and 9759874 on chromosome 01 strand -
mature miRNAs for MI0001096:
         osa-miR159e (MIMAT0001026): ATTGGATTGAAGGGAGCTCCT

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
AAACGAAAAGGCTGATTGTTTGTTCAGTCTTGAACTTTTCGGTTTATAAGCTGGTTTACAATCCTAAACAAAGATAGATT
AAATTTAAACTAACATATAGGAGGCTCGTTGTAACCTGAGCTACCACCAAGTATATGCACGCAGATTATCTGGAAATGTC
TCACCATTTGGTGGGAATTGTTTCCTTTTGCATATTTGCATGCCTCACAAAACATCAAGTCAATATACAAAGAAGCGTGA
ATCAAGCAGAAATAGCTGAATAAATGAATAATGGATATGGAAACTTCACGACAATGTTAACAAATACTGTGAGAAAACTG
AGAATCATGTGTAAAAAGGAAACAAATTTGCACGTATGATATTCTTTTCGCGATTTTCTTTTTATGACAAGTGCTCGAAC
ACACGAGGATTCGAGAACGAGATCGACGCTTCCAACAGCCAAATCCGGCCATCAAATTGCTTTCTATATATACAACATTA
AGAGATTCGCGAAAATATTTTTAAATAAGCTAGCAACAAAACCAGCCGCCAGAGCCTCACTTGCCATGCATGGATGATAA
ATACCGATTAAAAATCACGAGGCCAATCGAAAAAAAAGGGCAAAGGTCAAGAAAGAAATTAATGGCAAGTCATCAATCCA
AGATTAGCCCGACTTCTATATAAATCACCAACCCCTAAGCAATCGTCGTACTCATCAGAACTCATGTGTTCCTAGGCTAG
AAGAAACCTATATCACACCCCCCCCCCTTTTTTTTTTGTTGCGTTTGATAAGTAGAAGATTGACGATATAATATTGGTGT
GATGTGAAGGGGATCAGAAGATGATGAAGAAGAAGAGCTCCCTTTCGATCCAATTCAGGAGAGGAAGTGGTAGGATGCAG
CTGCCGGTTCATGGATACCTCTGGAGTGCAGGGCAAATAGTCCTACCCTTTCATGGGTTTGCATGACTCGGGAGATGAAC
CCGCCATTGTCTTCCTCTATTGATTGGATTGAAGGGAGCTCCTCTAGCTACATCTCTGTCATCTCTCTCTCTCTCTCTCT
TTGATATTACTATATCATCATGCATGGTATGTGTATTAACGTTGTTTGCAGCTAGCTTCTTGTTCTTGATTAATTTGGGG
TTTTTTTTATCACCACAGGAGTGAGTATACAATGACAGGAAAGCAGAAGAAGAGGTATAAATGTCACATCTTGTTTTAGG
TTAGTTTTTATGAGATAGAAGGAGTATATATTAGTTGTCGGAGGGCCGGAGGCAGATTGTCCAAGAGCCATGATTATCAA
TTACGAGAAAATAAACTAGCATGTACACGGTACTTTTGTTTCTTTTTCTAATTTACTCATTCTGGTCAAGGAACAATATA
ATGTATATATAAGGACATGTTGCGTTCTGGTTTTCTGCAGTAATGAACGATCATTTGTTTTTCTTCTCCTTTTTAAGCTT
TGATATCAATCTAAATATCTAACGTTTGAATATACATTTGTTCTTGAAAAAAAGTTTCCCTGTTATATAGCCCTGTTTAT
GTCTTTATTTTTGTCCTTTGGATTGTATATATATTAATTCTCACTCTATATTTAGGCGTTGTTCAGATTGATGCCAAAAA
TGATATGGTTGAAAATATCATGAATCTGAACTGCCTCGAGGTTATTAAATATTTAGGCGTTCGTGCCTTAGTACCTCGTA
AACCCTATTCTTAATTTATTTATCACTTTTTTATTTTTAGTGCGCATGAAAATAGATGGCATGGTACTTTATTTAGATCA
ACATGATTTTTAAAATATTGATACAACACTTAGTTTAATTATCATAAATTGATTCTAAAATTGTATATACATTCAAAAGG
CCTATTGATGGATTTAAAAACAGTAGCTTGTAGAGACCTAAAGATTTGCAATCATCTCAAGGAAATCCGTTGTATTTTTA
TAGCATTCGCTGTATTTTTTAAAAGAACAGAAATCTTATTTTTATTTTTCTGTCAACTGTTTATTTATGTGGGAGCGTAA
AATCGTAATTGATCGTTACCAGCCACGAAGCACCAAGGCCATAACTAGGTGAATATCACGTTTAACGCTGAGGTTACCTT
GTAAATTTAATTTACTAAAGGACCAAAATACAAAATTGCAGTGACATCCTTATCGTCTACTCCCTGCTAGGTTTTTCAAC
TCGACATCATATCACCCGCTATTTACATGTAACTCGAATAGCTAAAAAAAATTGGAAAAAGAATAGTAACATCAATTAGG
ATGATATGAATCCATAAACAAAAATACAAGACTAAATTTAATTTAGAACCAGAGAAAAAATAATAAAATCAAGGAGTGAA
TAGTACCTACACAACGTAGATAAAATTCGTTATTTTTCTTTCTTCATGTGTAGATTGAATTTAGATTTAATGTTTATATA
GTGTCTTATATTATCAAATATCTTATTAAATTTTATAAATATTTTAAATAACTATTTAAACCACATAAATATATATGAAC
ACCGTAGCATATAGGTGTAGAAAATACTTTTCCCCTGCCCATCTCCTCTCTCGTCTTCTCACGGAGGGCCGGCGGGGCAT
CCGGAGATCTCTTCCCCAATCTCTCTTGCCCACTCATCACTCTCTCCCAGCTCATCAATATGTTTGAGAGAGGATAGGCG
GTAGCCATGCTTTTTTTTTTTCCTTTCTTTTTTTTTATCTTTTCTTTTTCACACTTTAATCTTCATTATTTTCTTCACTT
TAAATCAATTGAACAAGTTCCAACTTTAACGTTTCTTCTTATATATTCACCAACTACAGTTCTACATCCTTCATCCTTCA
TTTATCAAATTCAACAATGAAAATCATCTCAGTTTGATCCAACGTCCCAGGCTGTCTACACTGGTTCCTCCCAAAATCGC
AGAGTGCAGTTCTACATCCTTCATTTATCAAATTCAACGATGGAAATCATCTCAGTTTGATCCAACGTCCCAGACTGTCT
ACGCCGGTTCCTCTCCCAAAATCGCAGTGTGTCATTCATG