Basic information from miRBase |
hairpin accession number: MI0001097 |
Located between position 6692112 and 6692299 on chromosome 01 strand + |
mature miRNAs for MI0001097: |
osa-miR159f (MIMAT0001027): CTTGGATTGAAGGGAGCTCTA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GTGGGGGAGAAAGGAGGGAAGGAAGAAGAAGTATGGGACCAAACACTATAAGTCTAAAGCTTACGTGACAATGAACTTAG
CCAGGCCTTGCCATATCAGCCTAAACCAAGCACAATACTGCCCTAGAATCTGGAGTAGTCCGGCATTGCAAGTAGACGAA
CACATTATATCTGGTATTGCGGTTTAAGGATATGATTCAAACTCGAAGTCAAGGAGGGATCTAAAGTGAATTTATTCCGC
AACCATTTGACATATTCTTGTAGTGGCCTTTGATGGTTGGGCTTGGTCATGTAGGAGATGTGGGATTGACTTGCTTTGTT
TGGGCCAATTTCTCTTTATTTTTCCCTTAAATTTCCCTCATGCATTTTTAACCATGTGCATCATTTGTACAAGTATTCCT
CAAGGTATCATAATACCTCATATACCTCGTGATATCAAGATATTACTGTACTACACATGGTACCCCGTATATATCATCTA
TGGTACTTGTATACTACTAGTATCAGAACTATCCCTCTAGGATCGTAGGTGATAGATCAAGTATCTAGGTATCAGATATA
ATACATACCTAGTACCCACATCTACCATGTCTAGTACATGAGTATCATGCTTGGCACATGTAGATATCACTTTTACCGGT
CCGATACGCCCAACGTACCATCCAAGTAGAAAATGTGGCCAAAACATGGCTAGGTTGATCGGTCAACTCTAGCTAGGACG
ATACAAGGTACTATCATGCAAAGGAATTGAGATCCAGTACAATTCAAACTGTGACTTCAAGTTAAAAGGACTGCACTCAA
TGTCAGCCATTCTTTTTTTTTTAGTGAATGGTTGAAATTTGATGCTACAATACCTCTATAATTTTCCCACAAGGGCTATA
TTTGTGTTCATCTTCTTCCTCAACTAGAGATGGCAATGGGGACCCGATCACCGGTTCCCCGCGGTGAATTCACATATTAG
GGAATGGGGATGGTTGATATTTATCCTCCATGGGGAATCATATGGTCTCAAACTTATCACCGTCGGGGATGACGGGGCCG
GGGACGGTGCTCCATTCACCGTCCCCACCCCCCACGGTGACCCGCATATACTATATCCAGGACCAAATCTAGACTTTCTC
AGATGTTTTGGCCCATAATATTCAAGCCCAAGTAACAGGTACGAGTATATAACTCCTAACCCTACTAGTCAAACTCCACA
CATTCAGAGTTCAGATTCAGATCGAGACATATCGAGACATGCCGTTGCTCCTCCTCCCCTTCAGAGTTCAGATCCAAATC
GAGACACGCTGTTGCCGCAGCCTGCCGCGCACCAGCCACCAGGCGCGCCGCCGCTGTCCAGACGCGCGCGCAGCCGCCGT
CTTGCCGTCCGTCCGGCGCTGCCTCCTTTTTATTTATTTCCCTTTTCTCCTCGCCTCGCCTCTCCTTTTTTTCTTGTGTG
GTGGTGTCGACACGTCGCCGGGAGCCACCGTCGTCACGCCGCTTGGCGCCTGCAGCCGTCGTCGCGCTGCCGGAAGCTGC
CATCGCCGCACCGCCCGACGCCTGCAGCCGTCGTCTTCCCGTCCGTCCGCCGTACGTCGCCAGCGCCCTTCGTCATCGTC
GCCATTCGTCAGCATGCCATCCGCCGACCATGAATATGTTGTTTAACCGGGGACGGGGTAACCACGGGGATAAATTCACT
GCGTGGTGAACGGGGCTGGAGAAAATATACCCCCGTCGTGGTTGACGGGGGCGGGGACGGTGAAATTTTATCACCGCGGG
GACAGGGACGCGGAGATGACCCCCGATGGTGAATTCCCCGTTGCCATCTCCTCAACCGTTCTAGCCGGTGGTGGTATAAC
CGTGCACTGACGACCTTAAATAGAGAATTAGTAAATAAACATAGAAAATTTGAAGGTAGGAGGCCAGATCTGGGAGGGAG
GGCTATATCTTTGTCTCGTCTTCTTCCTCAAACCGTTCCAGCCGGTGGTGGTATAACCGTGTGACGCCGGCCTTAAATTA
TTTTATTTGAAGGAAGGATTCTCAAAAAAAATTGGATTGCACGAGACAACGTACCATAGACATGTAAATAATAATATGCA
TGAGAAGGAAAATAATCAACCAAAGGAAAAGTAGAATTGTTTTAGCACAAATCAAATATGCTCAAAGGCCCAAGCGATAA
ACGTCCAACTAAAATATTTTCTTCTCTGATACTCCCATAAAGAAATGAACTTCAAGCAGCTGTTAGTCAGATGCCTGAAC
CTGCATTCGACAGCCAACTGGCTGGTGGCTGCAATAAGCCAATAACTGAGCATTATGTCAGTGACATCATATTCGCTCCA
CGAAACCGAATACAACATGAGTAATGATTTGCAGTAGTATTTGCTTTGCTTTTCTATAAAGACAAGATGCATTTCATTTT
CATTGCAACTACACGGCATAAAACAAGATGCTTGGATTTCTTCTCGGTGATGTAATGAGTAAGTGACACTACAACTATAA
AGTTATTTTTTCCTCTAAAGAAACAATTACAAAGTTAAGCTGGTAAATATTTCAAAAATTCTCAACAGATGAAGAAATAG
CATTAATTAGTTCTCCAAGCATCAGAAGCATTAGCAATTTTTGCATATTATAAACGTTCACAACAGGGGACAGGAGGAAT
CCAATTGCATACTGGATTGGAACAAAGTAGTTAAAGCAGCTAGTAAGTGATTTAGAATCGAATAAAGCATAATAAAACAA
TACATCAGCTCGTGACAAAATGGTCTTGCCTTGAACCATAAGCTTGTTGAATCAGAAGTATACATTCATATGTTCTTATC
TTCTTTAAGAACTATGCAAAGTGAATCGCCAATATTTCCATGGTTAATGAACAGAAATAACTCTCGTATGCATATATAGT
GGAGGTTATATTAACAAAAATCCTAATGTCCTCACAGGAAATTTATTTCCATTTTTCTGGGTAAAGCAAATAAGTAGATA
TTTTATATCGGCAAAAAAAGTTTCAAAACTGAAACTTTTC