miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001097
Located between position 6692112 and 6692299 on chromosome 01 strand +
mature miRNAs for MI0001097:
         osa-miR159f (MIMAT0001027): CTTGGATTGAAGGGAGCTCTA

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTGGGGGAGAAAGGAGGGAAGGAAGAAGAAGTATGGGACCAAACACTATAAGTCTAAAGCTTACGTGACAATGAACTTAG
CCAGGCCTTGCCATATCAGCCTAAACCAAGCACAATACTGCCCTAGAATCTGGAGTAGTCCGGCATTGCAAGTAGACGAA
CACATTATATCTGGTATTGCGGTTTAAGGATATGATTCAAACTCGAAGTCAAGGAGGGATCTAAAGTGAATTTATTCCGC
AACCATTTGACATATTCTTGTAGTGGCCTTTGATGGTTGGGCTTGGTCATGTAGGAGATGTGGGATTGACTTGCTTTGTT
TGGGCCAATTTCTCTTTATTTTTCCCTTAAATTTCCCTCATGCATTTTTAACCATGTGCATCATTTGTACAAGTATTCCT
CAAGGTATCATAATACCTCATATACCTCGTGATATCAAGATATTACTGTACTACACATGGTACCCCGTATATATCATCTA
TGGTACTTGTATACTACTAGTATCAGAACTATCCCTCTAGGATCGTAGGTGATAGATCAAGTATCTAGGTATCAGATATA
ATACATACCTAGTACCCACATCTACCATGTCTAGTACATGAGTATCATGCTTGGCACATGTAGATATCACTTTTACCGGT
CCGATACGCCCAACGTACCATCCAAGTAGAAAATGTGGCCAAAACATGGCTAGGTTGATCGGTCAACTCTAGCTAGGACG
ATACAAGGTACTATCATGCAAAGGAATTGAGATCCAGTACAATTCAAACTGTGACTTCAAGTTAAAAGGACTGCACTCAA
TGTCAGCCATTCTTTTTTTTTTAGTGAATGGTTGAAATTTGATGCTACAATACCTCTATAATTTTCCCACAAGGGCTATA
TTTGTGTTCATCTTCTTCCTCAACTAGAGATGGCAATGGGGACCCGATCACCGGTTCCCCGCGGTGAATTCACATATTAG
GGAATGGGGATGGTTGATATTTATCCTCCATGGGGAATCATATGGTCTCAAACTTATCACCGTCGGGGATGACGGGGCCG
GGGACGGTGCTCCATTCACCGTCCCCACCCCCCACGGTGACCCGCATATACTATATCCAGGACCAAATCTAGACTTTCTC
AGATGTTTTGGCCCATAATATTCAAGCCCAAGTAACAGGTACGAGTATATAACTCCTAACCCTACTAGTCAAACTCCACA
CATTCAGAGTTCAGATTCAGATCGAGACATATCGAGACATGCCGTTGCTCCTCCTCCCCTTCAGAGTTCAGATCCAAATC
GAGACACGCTGTTGCCGCAGCCTGCCGCGCACCAGCCACCAGGCGCGCCGCCGCTGTCCAGACGCGCGCGCAGCCGCCGT
CTTGCCGTCCGTCCGGCGCTGCCTCCTTTTTATTTATTTCCCTTTTCTCCTCGCCTCGCCTCTCCTTTTTTTCTTGTGTG
GTGGTGTCGACACGTCGCCGGGAGCCACCGTCGTCACGCCGCTTGGCGCCTGCAGCCGTCGTCGCGCTGCCGGAAGCTGC
CATCGCCGCACCGCCCGACGCCTGCAGCCGTCGTCTTCCCGTCCGTCCGCCGTACGTCGCCAGCGCCCTTCGTCATCGTC
GCCATTCGTCAGCATGCCATCCGCCGACCATGAATATGTTGTTTAACCGGGGACGGGGTAACCACGGGGATAAATTCACT
GCGTGGTGAACGGGGCTGGAGAAAATATACCCCCGTCGTGGTTGACGGGGGCGGGGACGGTGAAATTTTATCACCGCGGG
GACAGGGACGCGGAGATGACCCCCGATGGTGAATTCCCCGTTGCCATCTCCTCAACCGTTCTAGCCGGTGGTGGTATAAC
CGTGCACTGACGACCTTAAATAGAGAATTAGTAAATAAACATAGAAAATTTGAAGGTAGGAGGCCAGATCTGGGAGGGAG
GGCTATATCTTTGTCTCGTCTTCTTCCTCAAACCGTTCCAGCCGGTGGTGGTATAACCGTGTGACGCCGGCCTTAAATTA
TTTTATTTGAAGGAAGGATTCTCAAAAAAAATTGGATTGCACGAGACAACGTACCATAGACATGTAAATAATAATATGCA
TGAGAAGGAAAATAATCAACCAAAGGAAAAGTAGAATTGTTTTAGCACAAATCAAATATGCTCAAAGGCCCAAGCGATAA
ACGTCCAACTAAAATATTTTCTTCTCTGATACTCCCATAAAGAAATGAACTTCAAGCAGCTGTTAGTCAGATGCCTGAAC
CTGCATTCGACAGCCAACTGGCTGGTGGCTGCAATAAGCCAATAACTGAGCATTATGTCAGTGACATCATATTCGCTCCA
CGAAACCGAATACAACATGAGTAATGATTTGCAGTAGTATTTGCTTTGCTTTTCTATAAAGACAAGATGCATTTCATTTT
CATTGCAACTACACGGCATAAAACAAGATGCTTGGATTTCTTCTCGGTGATGTAATGAGTAAGTGACACTACAACTATAA
AGTTATTTTTTCCTCTAAAGAAACAATTACAAAGTTAAGCTGGTAAATATTTCAAAAATTCTCAACAGATGAAGAAATAG
CATTAATTAGTTCTCCAAGCATCAGAAGCATTAGCAATTTTTGCATATTATAAACGTTCACAACAGGGGACAGGAGGAAT
CCAATTGCATACTGGATTGGAACAAAGTAGTTAAAGCAGCTAGTAAGTGATTTAGAATCGAATAAAGCATAATAAAACAA
TACATCAGCTCGTGACAAAATGGTCTTGCCTTGAACCATAAGCTTGTTGAATCAGAAGTATACATTCATATGTTCTTATC
TTCTTTAAGAACTATGCAAAGTGAATCGCCAATATTTCCATGGTTAATGAACAGAAATAACTCTCGTATGCATATATAGT
GGAGGTTATATTAACAAAAATCCTAATGTCCTCACAGGAAATTTATTTCCATTTTTCTGGGTAAAGCAAATAAGTAGATA
TTTTATATCGGCAAAAAAAGTTTCAAAACTGAAACTTTTC