miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0000665
Located between position 1706571 and 1706669 on chromosome 08 strand +
mature miRNAs for MI0000665:
         osa-miR160c (MIMAT0000630): TGCCTGGCTCCCTGTATGCCA

References
[1]Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP, Genes Dev. 16:1616-1626(2002)., "MicroRNAs in plants"




>promoter (3kb upstream pre-miRNA, by PMRD):
CTAAGAAAACATTCTTAGCTCCATTATACCTTTGCCTTGCGCCATCCAACTTGGGGTCAATGCTTGAGCCAACATCAACA
CTTGTGACCATTCGGTTGAACCATGTTTATGCCGAGATCTTTGCCATCCTTTGTCAAGACTTTATTCTCATCACAAGCTT
GACTTCATTCTTGCCAACATGACGATGTCCTTGGCTTGGTGACCATTAACCCATGGTGTCATTCATTAGCCTCATCGCAA
TTAGATCTATTCCTTTGCACGACTCAAAGGAAAACATTAGTCCCAACAAATCGGTTGGCACCCTCCACTTGGTGACCAAC
CGGTTGCTTATGAAAGATATGAATATGTTTATTGAGTATTCATTAACATCATAAGTGTCATATACTCATATGCAAGCTCA
AGTGCAAAGATCCGATATATATAATAGGTGAACAACATGGATCTAAAACATGCACAATAAATGTATAGGATTTGCTCCCC
CTAAGTATATGCATACAAAGAAATATACAAGAGAGACAAGTGTATGCATAAGTAAAGAAGAACCAATGGGGGTTTATCCT
GTACACATAGAGAATGCATATGTAGTAATGATGAAGATAAACAAAAAAACACATACCTTCATGATCTCCATGTTCTCAAT
GTAAAGGAGACTAAATAAGATAAGACTCAAGTAAACATTAGTCTCACACTTATATAACAATAACATGGAAATCATATATA
TGAACCTATCAAAAAGTAGGTGATAAGAAGTGATACATATCGCTTTATCTCCATGAATTTCATCCTTGTCATGATTAAGG
TCCATCATCAAAGAATGCATATCTACCACATCTCATTATCGGGAAATAACCTTGTTGAAAACTTATGTAAAAGAGAGGTT
AATCCCATAAACATCGGTTTATCATCTATCACCAAAGTAACAATTACACAAATTGTTTAATCCAAGATTTTTCAATCTTT
TCTCTCTTTTGTGATAGATAATAATCCGATATAAACAATACAAAGAGATGGGATGAAAGATAATTTCAAATCAAAGTAGA
GATCTTATAATGAACAAAATATAGAATAAGCTCCCCCTAAAGATGTGCATACATATGGATATGAAGGAATGCATATGCAC
ATAATCAATCAAGATCAATGAGGGAGCTCACACTATATTTTGGATCTACAAGAGAGACCAAGTTAGAATATGTGAAGTTT
AATACATACCTCCCATCATTTTTACTTTCATATCCAAATAAGACTAGTCAAAGAAAGGCTCATAAAAACGTTAGTCTCAT
ATAATTAGATTTATCATTAATCACCGAAACCAAATTAAGTCACTTGAACTTACAGTTGCTTAGTTAACGTCATCTGTACA
TCATGAACTATGGAGTACTTGATAAGATTGATCATGGATGGAATTTTCAACTTTTAAGTATTATTAGATAATGGCAAAGT
TTAAAACTCATAAATGAGGGCATATACATTATTAACCAAATCATGAAGAGGTATATGCTCTGCCACGTAATATGGTCGGC
TACATGCATGCATGCATATATGCGTGAATAATTGCATGTATACATGCATCATATCGAGAGCAGTGTGACACGTAGGTTTA
TTATCATGGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
ATATAAATTTATACATGTTAGATCCTCTAAAAAATATTATATATATTATCTATGTGTGTATATATGCGTGGGAATATATA
TATACATGTAATGCACACGTCGATGAAGAATATCGTAATGTTCCAAAACCGAAATTTGAGTGGTGCTTATTAATTTGCTC
GCAATGCATGCCCAACTAGCTACGAAGAGAATGTGAATTAAAGCAAAGGAATATTTTAGAAAAATACAAATTGTACCTTC
ATGCATGGCTACCTACCAATAATATCGATCAAAATCAAATGATCCAAAGTGGCCGAAAGGGTGCGTGAAGAACATCAAGG
GCCATGCGTTTTCCAAATTCCTTTCCTCCCTTCTTTCTTAGGAATCTAATTACTAACTCCATTGGAATTGGATGTTAGTT
CCAAAGCCTAGCTATAGAGTCTCTCCTGCTTTTCTACGGGCCTAATATATATATGTAAGTCTAGGTACTTAAGTAGGTAT
ATATGTAGGAGCTAGCTAGCTAGTTTTAGAACAAGAAAGTGTAGAATAATCACCACCCTAAACTCAACTAGAATCATTTT
GTCAATGAAAATGAAGAATAGATTAAAATTAATGGTTTATAAAAGTTTTAGGCATGTGAAACTCATATCGCAACTATAGC
AATTGCGGCTCCAGCTCTTTCTTAAGGTGTACGTACCAAATGTGTTTGCTCCGTCCATATTGGGAGATGATCCAGTGGTT
CGTATAACCTAAGAAAATAAATAATTATTTTATTTTGTAGCACTGAGAGCTACACTGTTAATTAATAAGGTAAATAATTT
CTGAAATGACCACATATACTATATTGTACATATTAATTTCAAATGTAATGCAATTTTAAAAATTTGTGTGCAATTTTAAT
ACAATGTCATATTTTTTAAATTTGTGTACAATCGTATCTATTGGTTTGATCAACTAGTTTATTTGCATGTAGATTTTGAA
TCAAGGAAGGACAATTATATGTGAGCCTTGGTTTACGGTCTTCTTTTCATTCGATCCATTAGTAAATCAATTGAAATGAA
CAAAGCATATATGTTTTCTTAGGAATAATATAATGCATAACAATCAGCCATCTATAACTCTATATGTATTTTATTTGTTG
GTAAGAAAGGATCACCTTAAAATTATTTTCTCAATCAAGTAATGGTAAAAAAGAAAATGCAATGCAGTAGATTAAGAAAA
AGAAAACCAGCAGGTCATTATATGCATATAAATACGGATTACTGAGCCAAAATTTATATACGTGTTCTTAACTATCTAAA
AATAAATGCTGAAAACTAAACTTTGATAAAAAAAAACTCA