miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0000666
Located between position 32447861 and 32448002 on chromosome 03 strand +
mature miRNAs for MI0000666:
         osa-miR160d (MIMAT0000631): TGCCTGGCTCCCTGTATGCCA

References
[1]Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP, Genes Dev. 16:1616-1626(2002)., "MicroRNAs in plants"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTCTCAAACTAGATATAGGATTTAAATGGTAAAATTAGGTACTTATCTTGCAATTTTACAAAATATCGGCCGCGGGGGGG
GGGGGGGGGGGGCATGGCCAAAGTTAGCCCTAGAGAAGATCCAACTCTGAATACTTACATTCTCAGATGAAAAAGACTTG
TCTGTGTTCAGCTGCGACTGGAAGCAGCAGTAATCACAAACGCTGCAAGGCCTGCGCAGTTCCAAAACAGTTCCAAGTAC
ATCACAGATTTCATCATTTGAACAATGGAGAAGTTGATGACATTAACACATAAAACATGGGCTAAATTGCACCTTGCTGA
ATACCATAGTCCATGAGCTTCAACTTTCGGGGGATAACAAAGACCTGAAAAATATCAGAGGATATGCTAATTACAGAATA
CTACTATCTATAATCAATCACAAGACTTCTGAGCCACTGGCAACTTAGGGTCCAGGAGACCTTTCACATCTAGGGAACTT
CAGTCAACCAATCCTCACATTTCCAGACAGCGATTCCAAACAGCTTTCCTGCTTTGAGAGTACAGCTAATTCCATAGTTT
AGAAGAAAATAAAACCAACATGTTCTTCGTGCAGCATGCTCTTGGTACCTTTTGCAGCCACAGTTAACTATAATATTGTT
TAGTTATAATATTGTTCCAATTCTGATGGGTAAATTAATTTGAGAGGATAAACAGGAACACCAAAAGGGAAATGAGACAA
CGATATGGAGCAAGACTACCTTCTCAATGGGACTAGACTCATAGCATTGTAGTAACTGTTTAGCTTTCACTTGGGAACTG
GATTAGTACTATCATAAGAAAGGTTAATTTAGTCTAAACTCTGTATAGGATTTGATTGGTAAAACTAGGTACTTATCTTG
CAATTTTACCAAACAATGGGGCGCCATGGCCGAAGTTAGCCCTAGAGAAGCTCGGACCCTGAATGCTTATATTGTCAGAT
GAAGAGAACTTGTCTTTGCTCAGCTGCGACTGGAACTGGAAGCAGCATCATACGGACAAACGGACAGCTGCAGAGAGCCC
TGTAAATATGGCAGAACAACGTACAGCTGCATATCACATTAAATATAAAAGAGTAAATTTCACATTGCACCATATATTTT
GATCAAAGTTTCACAATAGGCAAGGTCCACACCAACCTTTTCACTAAACACCATATATGTTTGCACTAGTTGGCACTTTG
GACTAGGGTTGAGCACATAGAAGGAAGTTGCCAGAGAAAAGATAGTTAAAATCATCAATTTTAGTGCCACGGTATTAAGA
TAAATATCTTTAGAAAAAAATAGCAAATCTGAAAACAACTTTTTTCAGCAAATCACACTAAAATAATGACGTGAACATGT
TTAAAAGTGGCACAAAATGATCTATACATTGTGGTAAATGAATAAAAATAAAATAGAAAATAAAACTAGTTAACTACCAC
ACATGAAAAGAAGGAAGAAAACATAAAGTGTTTTGCCTTTTATAATTATCCATGTGTAAATCATATGAAGCTCTCTCACA
TATTCCCTTGTTTTGCTCATCCCTAGTTCAAACTGAAAATTTATGTAAAGATGTATGGTGTTAAGTGAAAACATTGATTT
AACCCTAGTCCATTATAAAACCTTGGTTAAAATATGTGGCCCATTGTAAAATTTACTCTATATAAAAAGAGTCCAACGCT
GTTCATTTTACTGAATTTCGATTGTGTACAGAAAGGAGCAAATGGCATCACAGATTCACAGGTTTGGGCAATGGAACAGT
TGATGACATTAAGACATAAGACACTGGCAAAATTGCATCTTACTGAATACCATAATCCATGAGCTTCAGCATTTCTTCCT
TTCCTTTTCTTTTTTCCTCCCCCCGCTTCACCCCCCTTTTCTTCAGACAACTTTGTAACTTTTCATTTCTATAATGAAAT
GGCTATAAGGTAGAGCTGGCTCTATCTTCTTACATTAAAAAAAAAAAAGAGGTTCAGTATTCAAGCCATAACCAAGACCT
GAAAAATAAACAACTTCAGTCAACCAATACTCACAATTCTAGATAGTTATTCCAAGTAGCTTTCCTGCTTTGAGAAGGCA
GTGTATTGTATGACAAACTCAAAACAGCTGAGAGTACGAATAAATGCTAGGTGCACACGAAATCGTCAAATTGTAGGGTC
TAAACTGCATTTCTCATACCAAGAGAATATAACAAAAAAATCAGTAGTTAAGTTACGCTTCCATTAATTCGTTGAACTTA
CAGATAGAGCTCAGTTCTGCTGATGTGAATCATACCACACAGTTGGTTCAGAACATAGCCAGTCCAGCTACATGCCCTAT
AAACAGAAATATCGGCAAGAGATGAACAGGAATAGGGATCTTACTATCTCAGTATCTTACAGTCATTTTGTTAGTCCACC
AAAATGCAAGGGGAAACATTAGTCAGGACAAGCAATTGTATACATCTATAAGCAAGAAGCAAAAGGTTTGATCAATGCCA
GCCCAATTGCCTCACTGAGCCAAATTGACATTCTAGTCTACTAGCACAGGATATGGAAAATGAATCTATTGACAAGTGGG
CAGGCATCAGCACAAACTAGGAGATCTACAAAACTGATCAAAATGAAACTGCAAGTATCATAAATTAGTGAATTAGTATA
AATATTCTGAACGGTGACGCATGAAAATCAGTTACACTCATGTGGTTCAGAAAAGTTACCTCAAGACACAGGAGAGATTT
GGACATTGAAGACCAAAAGAAGTTTATATATTTATTCAATAGGCTAAAAACTTGCACCCTGATTACAAGCAATAGTTGCC
ATAATCTGAATACAATGTACAGGAGCAATGAAAATATATCACTCTTATGGTCACTGCAAAAAAATATAGCAACTCAATCT
GAAACAAGGAAAACTATGCTCTATTACAACATCACGGAGAAACCCTAGAAGCACTATCAGAATGCCATGTGTTACATGCC
AAGCCTATAAGTGTTTATCGACAAGTTGCTCAATTTGTCC