Basic information from miRBase |
hairpin accession number: MI0001101 |
Located between position 24394168 and 24394267 on chromosome 08 strand + |
mature miRNAs for MI0001101: |
osa-miR160f (MIMAT0001031): TGCCTGGCTCCCTGAATGCCA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TCAAAAGTTGGGGTTGACTGACGTCAATGAAGGAAACGTCGTGCCCATCGATCCGGAGAAATTCACACCTGAGCAGAAGA
AGGATTTTGAAGCAATGTTGCAGCAAGCCCGGGATCAGTTCTTGAACTCATTCATGCAGACCCGCAAGGGAACATTGGTT
CAGAAGTATATATTATTTTACTTAAAAATTAAGCTCGGTAGTCAAGCTTGATCGAGCTCGAATCGAGCATGTTTGAAAGC
TCGAACATTTTATAGGCTCGGCTCGAGTTTGTATTGAGCTCGAGCCTAGGTAGCTCGAGCCTAGGCAGGCAAGCTCGCTC
GAGCTCGGCTCGTTGATAGCCCTAGAGAGAGGGAGTAGGCATTACAAATATTATCTCTATAGAGATAAAATTCTAACTTG
TAGACCAATCCGAATCGATTTTAGAGATAAAACCGTTCTGATCTCTAAAACTTCCTCTACTTAAAAATAGAGGTACTGGG
TGCCTATTATTGTACACACAATGATTGATACTCCCCCGTCCTAAAATATAATAACTTTTAACCCTCAGGATTTGTCCCGA
AATATAATAACTTCTCCACCAACATTCTCTTCCCAACAAATCACAACCCTCCACCATTCACTTTTCCCACCTACCTCCAC
TACTCAGCCAATCACAACCCTCCATCATTCACTTCTACCTACTTTCTTAATAAACATGTCCAACCATAAAACTTCTTATA
TTCTGGGATAGAGGGAGTAATAAAGAGAGAGCTCCACCCTTATACCTTGTGTTCATTGTCTCCTGTGGTGTGATTGATTG
GGAAGGGATACGGGCTTCTACATCTTCTCGACGCACCTCATCTTCCGAGGGAGGGAAGGGAGCGGATCTAGACGATGGGC
TTCTACATCTTCTCGACATGCCTCATCTTCTAAGGGAGGGAAGGGAGCGAATTTAGACGATCTGTTGACGTAATCGTTCT
ACAACAAGTAGGAACAACCTTCTCAATCCTCGGTTACGTGTTCGAGTTCCCTAATTGTCTCCCTGACCGGGTTTCATCTT
TTAACCGAACTAGCAATATATGTGCATTGCATTAGGTGAAGTCAATATTCACGATTAATAAAAACTCTACCGAAATAAGA
CAAACAAAACATTGACAAAACAAAATTAGGAATCATATATAGTATTGACTCCAGGTGCGCTCGCTTCATGCGTCATTACA
CGAAGAATTTCTTATATACAACATTCCATAACTTCACAAATCGAATCGATCGAGTGGCTATTCCATAAGTTAATGCATTG
GTGTTTTGCTATATCTCATCGATGAAAGATTGAAATTTTGATTATTCAATTAGTGAAAGTTTTTTTACTGTCGATAAAAA
GCGTTTGCGAAGTAACAAACTTGTCGCATATACACTTTAAACAATGATTATTTTAAAAGAAAAATATTTATGAGGAGAAA
ATTTTGGAAGGAAAAAAGGGTGGAGAAAAGAGAGATGATTAGAAAGAGAGGAAGAGGATCATGATGATTAGGAGAAAATA
AATAGAAAAAGAAACAAGAAAAGGGGATTACAAAAGAGAACAACAATCAAGAGAGGGGGCCTGCAATAGGGTGGCAAGAT
GGTGTGTGGTCTGGTTGTGTTGGAGTGGGAGGAGGAGGTGTATAATACTCCGTACATTCCAAATTGATCTACATATATTT
TTTTGAGGTTATTCCTAAATGATCTACATATTTGTGTTCATTTATTGAGTGTATTCGTTATTTGTGCATTGGAGTGAATG
GATATTGATGCATGCATCCATACACACAAGTATTTATAACCTACATACAATATCTTGATTTGCTATTGGCTAGGAAATAT
TGGGGATGGTGCATGCATTGAGTTTGTTGTTAGAGTAAATATAGTATGAGAGAGTTATTAGCTTTTCTTGGTCTTGGTGC
ACCTATGAAATATGTAGATCAATTTGGAATGGAGGGATTAGTTATTATATACCCATATTGAATTGAATATTTGCTACATA
CAATTAACTCATATACGAAAAACATACCAAAATTTCAATAAAAATATCTTATTTTTTATAATAATAGAGATGGAATCAAT
TGAGGCTATGGTTTTCAATTTTGTCGCTTAAGAGCAAGTTCAATAGTATAGCCCACTGCTAACTCCAATTCATTTATAGC
CAATCTAATAGCCAATTCATTCAATAATTGCTTACTATACTATTAGTATATGGTCCCACCTGTCATATACACACTGTGTT
TTGGAGTTCGTGCTGCTCTTCTCTCTCATTTTTTATCTCATTAAAATATATTTGTAGCTGGCTAATAGTATGCTATTGTA
CCTGCTCTTATGCTGTGTTTGTTGGTAGGGATTCCCAACTTACCATATCGTTTTCCACGTGCACGCTTTTCAAAATACAC
CAGTCCCAATAAACTGAACCCGCTGGCAGCACGCGAGAGGAACCGGTCGCTGCAATCACGAACCGAAAGATGGTCGTGCA
GCTCGACAACTTCGTGGAACGCAGGAGCTCATCGGTGATCCGCCGTTATCCTCCTTCATGGGAACTCAACGCCGGTAAAG
CTCGGATATGCCACGGTTGATGGCGCTTGTGGCCGCGCGCGGCGCTCAAGGGACGCCATGTTGCTTGAGGATGCGGGTCT
TGGCAAGGTTGGAGCTGCTCGTCCTGCTGTCCGGCATCCACACTTGAGCAGCGAGCTCGGCCGGCCCGCGGCGCGTGACG
CTCGGCTCCGTAGCCTCGCCCTCGTACGCGTGGATCCAATTTGTGTGGCACTTGATTAGCATTTCGGATTAAGTATTTCG
GCAGTCCCATGGATTCCCAGGGAAGAGACGCATCATCTTCTTGTGTTCTTTTGGGTTTCTTGTGTTCTTTTGGGTGGAGA
AAGAGGCAAACAACTTGTGTTTTGTGGAGGGAGATAGAATCACGGCAGAGAGATATCCTATGCACACACCTAACCTCGTG
CACTCGGTTGTTATATACCCTTCGATCGTGATCTGACGGA