miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0000667
Located between position 23599930 and 23600100 on chromosome 02 strand +
mature miRNAs for MI0000667:
         osa-miR162a (MIMAT0000632): TCGATAAACCTCTGCATCCAG

References
[1]Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP, Genes Dev. 16:1616-1626(2002)., "MicroRNAs in plants"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTCCGAATATATCACTAGTAGAGAAACAATTTTCTTGGACGAGGAGCTATTTAGTTTACAGACGGACCGTTTTCACGTCC
GCACGCAAAAATCGGCCTCCCATTTTCGTGTACGGGCCTGTAAAAAACCTGCCTACAAGTTTATCATTCCTTATCTTTTT
CCTCCTCAACACTTCAAAATTTCATCTCATCCACCCATCCTCATCCTTATCCTTTCTAGCTATTCTCTCTCTCACTCTCT
CACCTCTCTATCCTCTCTCACTAGATCTCTCCCCTCTCTTTCACTCTTCCTCTCTATCTCACTCTCTAACCTCTCTATCC
TCCCTCACTCTCTCACCTCTCTCTCACTCCCGGATATGGATGGCGCGGGCGCGGCCGGTGGCACGGCGCGGTTCGGCGGC
ATGCGCGCGGAGGCGACCTGTAGCGGCGGGCTCGGCGGTGCGTGCGTGCGGTGGCGGTCAACCGTGATTGGCAGGCTCCG
CGGCGGGCTCGCGGTGGTGAGCGACAGGGAACAGTGGGCTCGGTGACGGGCTCACGGTGGCGGGTGACGGGGAACGGTGG
GCTCGTAGCGGCGGACGACCGCCCCCCGCCCGGATCCGGCCACAAATGGATGGAGTTCTCGGCCATGGAGATGGACTCCT
TCATGTTAATGCCGGCGTGTCAGTGAGACAGAGCACGAAAGGATCCAAGATTCCAAGTTGAGCTGAAGCGGCCAGGATGA
CCCACTGTTGGCGAGGGTGGGGGGAGGTGAGGGATGATGACATGTACATCATGGCGCATGTGGCATGTGGATGATGCTCC
TACTACTTGTTTCGCTCCGGGGAGAGGCGGCCAGGCGGTGATTGAAGAGCCCCAACCATCACCGGGGAGCTATGGATCAG
GCTTGCGCAGCAGCTGCTGCTTGTTTCTCTCTGGGGATCCAAGGTGGAGATGAGGGATGAGGACGCCACATGTGGCGAGC
TTGGCCAGCGGTGCAACTCGTCCTACACCACTCCATCGTCGACATGGGTCAACATGCCACGTAGATGCTACGCCAGCGAA
AACCGTCGTCTATACTGCCCTGATAGTTATTTTGCATCAGTTTTAATAGTTGAAAGAGTCATTATACCTGATTTTGTGAT
TCGGGGATACAAATCATATCCGAGATATATTTGAGAGAGTTAGATTAGAATTTTTCCTTAAAAAAAGTTGGGCCACATTA
ATAATTCGAGAGAAGTTGGGCCCATCCTCGCAACCCTTTTCGGCTCTCCGCTCGCACCACCACCGATCTCATCGAATCAC
CTCCTCGAGACAACAAGGGGAAGTGCGGAATGGAGCTAAGTTTCTTTACCCAAACAACTTGGTTATGAGGGTTTCTATTT
CACTGGTATTTCTGGTCACCAAAATTTACAGGTGTTTCCTTTACACGTGAGAAAAAAGAAAAACGATAACTCCTAAGCAG
GCCATAAAGTTTTATTGTTTGAAAAAATAGCAACAAGTTACCCCACAAATGCATAGAACAACAAAGCCACCACAATTCCA
CATGTACTTTCTCGGTTTTATAATAGCGTCGTTTTGATTTTTTGCCTACTCAATTTTTTTAATAGTTTTGATCAAATATA
TAAAAAAATAAATATTTTCAATATAAAACAAACATATTATGAAAATATATTCAGTGTTATATTTAATGAAACTAATTTGG
TGTTATATATGTTACTAAATATGTTGACTTAGTGAAACTTAAGATTATTTTTTTAAAAAAAATAAAGCGACTTGCACATT
ACGAAAAGAGTATTACATCCGTTTCAATATATATTATAAGTCGTTTTAACTTTTTTCTGACTCAACTTTTTAAATGTGAT
CAAATTTATAGAAAAATATAGCAATATTTTTAACACAAAACAAACATATTATCAAAGTATATTAAATAACTAATTTGATG
TTGTAGATATTGCTAATTTTTTCAATAAACTTATTCAAATTTAAAGAAGTTAAAAATATTAAAACGACTTATGATGTGAA
ACTGAAAAAGGAAGTAAGGTAGTATTTCTTCCATCTTATAATATCGAGGCGACTACGGATCGGGTGCCCGATTTTTTTAG
AAAAATCAGGCGCCCACGTCATCATGATGTCATCTTGCATGCATGCATCTAAGCGAACTTTAAAATATTTATTCTCTTAA
ATTATTTATCCAAATCATGATCCGATTGTACCATTAAATCCGTTGCAATTAAATCTTTAAAACAAGACCACACATGGATA
TAATCCAATGAAAGAAATAGCTCATTATAGAATTATATTTAAATATTGCACGCTGTTACACCAAGTATATCAGAATTGTT
TCACTAATTAGATCAAAAATGTTTCATCGGACGCTGTTTGACCTTATATATGAAAACAATGTTTCAGCAAATAGTGAAAG
AATGTTTCAATTCACTGCAACATTTAATCCATACATAGCGAAACATCACGAGCATACTAGGTGAAATATTTTTGGTGGAA
CAAAAAATGAAACGGATTTCCTTAACAGAGGATTTCCATAATATCCATAATATATGGGTAATTTATTGCAAAAGAATGTT
TCAATTCACCGCAACATTTGATCCGTACATAGTAAAACATTGTGAATACACTAAACGAAACATTTTTGATGGAACAACAA
ATAAAACGGATTCACTTTACAGAGGCGATTTATTGCAACGGCCTGCGTGGTGGGGACACGTGGCAGGAGCGGCGCAGGAC
ACGTGGTGAGGGTGGCGCGCGGGGGGGGGGGGGGTGGGGGAGGTGGGGTTGCAGCATCGGGCTCCTGATTTGAGGCATTT
TCCTTGTAATATAGCAAACTTGGCAAGCACTGAATAAAACACATGCGAATCTTAGGCAGGGATGATGTGTCCAATGGAGG
TACGTACTAATAACCAGTCCTTGTCGTTGTATAGGACCTGAGCTGCTGAATGAAAGCGTCGATGCACCTCTCGTGACACT
CCGTGTCGGCCACCACCTCCCCCATCTTCCCGGCGTTGGC