Basic information from miRBase |
hairpin accession number: MI0000667 |
Located between position 23599930 and 23600100 on chromosome 02 strand + |
mature miRNAs for MI0000667: |
osa-miR162a (MIMAT0000632): TCGATAAACCTCTGCATCCAG |
References |
[1]Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP, Genes Dev. 16:1616-1626(2002)., "MicroRNAs in plants" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GTCCGAATATATCACTAGTAGAGAAACAATTTTCTTGGACGAGGAGCTATTTAGTTTACAGACGGACCGTTTTCACGTCC
GCACGCAAAAATCGGCCTCCCATTTTCGTGTACGGGCCTGTAAAAAACCTGCCTACAAGTTTATCATTCCTTATCTTTTT
CCTCCTCAACACTTCAAAATTTCATCTCATCCACCCATCCTCATCCTTATCCTTTCTAGCTATTCTCTCTCTCACTCTCT
CACCTCTCTATCCTCTCTCACTAGATCTCTCCCCTCTCTTTCACTCTTCCTCTCTATCTCACTCTCTAACCTCTCTATCC
TCCCTCACTCTCTCACCTCTCTCTCACTCCCGGATATGGATGGCGCGGGCGCGGCCGGTGGCACGGCGCGGTTCGGCGGC
ATGCGCGCGGAGGCGACCTGTAGCGGCGGGCTCGGCGGTGCGTGCGTGCGGTGGCGGTCAACCGTGATTGGCAGGCTCCG
CGGCGGGCTCGCGGTGGTGAGCGACAGGGAACAGTGGGCTCGGTGACGGGCTCACGGTGGCGGGTGACGGGGAACGGTGG
GCTCGTAGCGGCGGACGACCGCCCCCCGCCCGGATCCGGCCACAAATGGATGGAGTTCTCGGCCATGGAGATGGACTCCT
TCATGTTAATGCCGGCGTGTCAGTGAGACAGAGCACGAAAGGATCCAAGATTCCAAGTTGAGCTGAAGCGGCCAGGATGA
CCCACTGTTGGCGAGGGTGGGGGGAGGTGAGGGATGATGACATGTACATCATGGCGCATGTGGCATGTGGATGATGCTCC
TACTACTTGTTTCGCTCCGGGGAGAGGCGGCCAGGCGGTGATTGAAGAGCCCCAACCATCACCGGGGAGCTATGGATCAG
GCTTGCGCAGCAGCTGCTGCTTGTTTCTCTCTGGGGATCCAAGGTGGAGATGAGGGATGAGGACGCCACATGTGGCGAGC
TTGGCCAGCGGTGCAACTCGTCCTACACCACTCCATCGTCGACATGGGTCAACATGCCACGTAGATGCTACGCCAGCGAA
AACCGTCGTCTATACTGCCCTGATAGTTATTTTGCATCAGTTTTAATAGTTGAAAGAGTCATTATACCTGATTTTGTGAT
TCGGGGATACAAATCATATCCGAGATATATTTGAGAGAGTTAGATTAGAATTTTTCCTTAAAAAAAGTTGGGCCACATTA
ATAATTCGAGAGAAGTTGGGCCCATCCTCGCAACCCTTTTCGGCTCTCCGCTCGCACCACCACCGATCTCATCGAATCAC
CTCCTCGAGACAACAAGGGGAAGTGCGGAATGGAGCTAAGTTTCTTTACCCAAACAACTTGGTTATGAGGGTTTCTATTT
CACTGGTATTTCTGGTCACCAAAATTTACAGGTGTTTCCTTTACACGTGAGAAAAAAGAAAAACGATAACTCCTAAGCAG
GCCATAAAGTTTTATTGTTTGAAAAAATAGCAACAAGTTACCCCACAAATGCATAGAACAACAAAGCCACCACAATTCCA
CATGTACTTTCTCGGTTTTATAATAGCGTCGTTTTGATTTTTTGCCTACTCAATTTTTTTAATAGTTTTGATCAAATATA
TAAAAAAATAAATATTTTCAATATAAAACAAACATATTATGAAAATATATTCAGTGTTATATTTAATGAAACTAATTTGG
TGTTATATATGTTACTAAATATGTTGACTTAGTGAAACTTAAGATTATTTTTTTAAAAAAAATAAAGCGACTTGCACATT
ACGAAAAGAGTATTACATCCGTTTCAATATATATTATAAGTCGTTTTAACTTTTTTCTGACTCAACTTTTTAAATGTGAT
CAAATTTATAGAAAAATATAGCAATATTTTTAACACAAAACAAACATATTATCAAAGTATATTAAATAACTAATTTGATG
TTGTAGATATTGCTAATTTTTTCAATAAACTTATTCAAATTTAAAGAAGTTAAAAATATTAAAACGACTTATGATGTGAA
ACTGAAAAAGGAAGTAAGGTAGTATTTCTTCCATCTTATAATATCGAGGCGACTACGGATCGGGTGCCCGATTTTTTTAG
AAAAATCAGGCGCCCACGTCATCATGATGTCATCTTGCATGCATGCATCTAAGCGAACTTTAAAATATTTATTCTCTTAA
ATTATTTATCCAAATCATGATCCGATTGTACCATTAAATCCGTTGCAATTAAATCTTTAAAACAAGACCACACATGGATA
TAATCCAATGAAAGAAATAGCTCATTATAGAATTATATTTAAATATTGCACGCTGTTACACCAAGTATATCAGAATTGTT
TCACTAATTAGATCAAAAATGTTTCATCGGACGCTGTTTGACCTTATATATGAAAACAATGTTTCAGCAAATAGTGAAAG
AATGTTTCAATTCACTGCAACATTTAATCCATACATAGCGAAACATCACGAGCATACTAGGTGAAATATTTTTGGTGGAA
CAAAAAATGAAACGGATTTCCTTAACAGAGGATTTCCATAATATCCATAATATATGGGTAATTTATTGCAAAAGAATGTT
TCAATTCACCGCAACATTTGATCCGTACATAGTAAAACATTGTGAATACACTAAACGAAACATTTTTGATGGAACAACAA
ATAAAACGGATTCACTTTACAGAGGCGATTTATTGCAACGGCCTGCGTGGTGGGGACACGTGGCAGGAGCGGCGCAGGAC
ACGTGGTGAGGGTGGCGCGCGGGGGGGGGGGGGGTGGGGGAGGTGGGGTTGCAGCATCGGGCTCCTGATTTGAGGCATTT
TCCTTGTAATATAGCAAACTTGGCAAGCACTGAATAAAACACATGCGAATCTTAGGCAGGGATGATGTGTCCAATGGAGG
TACGTACTAATAACCAGTCCTTGTCGTTGTATAGGACCTGAGCTGCTGAATGAAAGCGTCGATGCACCTCTCGTGACACT
CCGTGTCGGCCACCACCTCCCCCATCTTCCCGGCGTTGGC