Basic information from miRBase |
hairpin accession number: MI0001102 |
Located between position 24220760 and 24220893 on chromosome 04 strand + |
mature miRNAs for MI0001102: |
osa-miR162b (MIMAT0001032): TCGATAAGCCTCTGCATCCAG |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GCATTCTTTCCACCACAGATGCGTGATTCTAATCAATGATAGTAGAAGGCATCCCAAAATCACGAGTCATCTCCCTGCTC
GATTCCCACGCATGCTAAAAATTTCTCAATAAATTGTCCTCCAAAGCGATCGACAAAGAGACTCTTGGTCAGCTGTTGTG
CAGGGTAACACCAACAGACCTCCACCTGAACTTTCCCTGAGCTCTCAAACTCTATTTTGAATGAAAGCTCTTAACTCTAA
AAATGATGTCCAGAACAAACACGGTTTGATTTGATCACAAACAAATGTACCCACACTTCTATCCAAATAAAGATAGCAGG
CCAACTTAAGAGAACAGGCAATATTGTTTATTTTTGTATCAAGAAGAAAAAGGAGGGGGTGATTACAACAAATGTAGCTT
TGACACCAAAGGTCCTACCTTACCATTCTCTCAAGAAGAGAACAAGAACAATATGCCTTGAAATTGGACAACCTCTGCAG
AAGGAATAAATTCAGGGTTGCCTTAGCCCCTCGATTGTCCCCATGAGGCGCCACTGTTACTTGTAGCCAGAACCTTGAAA
AGAACATGCAGTTACTCATAGTTCTTCCCAGATTTAAGGTAGACTGGTGTCTCCAGTGACTTGCTTGGGTGTCCTATGTA
AATTTAACTGGTCAAGCATTTCCTCCCGGTCTTGTGGAACCCAGAAAAACTATAGGTAACTATTACAGTTCCATACCCAT
GCCTAAAGCCAGAAATCATGATTCAGAGTCATCTCTGTTCCATGTCAACTACGCACTCTGAAGTCTAAACTCATCCTTTT
GGCCGCTCAGGGCTCATATGAACAACTCACGGCCTTCACCCTACCGTGACATTGCATTTGGATTCAGAACCATGGACAAC
AAAACCTTCTCCTGCCCCCTTGATGTCTGATTTAACAACACCGCTGTTTGGTAGACAAGGGCATTGCACCGGTTCACCCC
TGATAGGCTCCCCCTCCCTTCATCCAGCCAACCCGCCAAAGGAGAGAACTCCGCAGCTGGCTCATGGCAAGAGATTAATC
TGATGGTGGATTTCAACATGGAAGATGATGGAAACTTTGTGCTTCATCCAGTCGCTGCATGATCTACAAACCACTACATA
GATTTCAACATGGCAGAGCTGACTCTACAAACTTTGTGTTTTTCCAGTGAATATTCAGGAATATACAAGTGGTCCTCAAC
ACAAACGGCTAGACATACTTCACCAATTCGCCTTGACTAACACCACAGAATCAATGTGTGTGGAGATAAGATCCAGACTC
AATATGGACTGGTACCATTGTGCTACACTTGACCCAGATGGCATATCCCAGCAAAATATCTCTGCCCAATGACGGCAGCC
AGTACAACATGTAGCGGACCTGAATGTAGTTATCCCAACGAACATCCGTTACTTTGTCATGACTAGACAATCAAAGAGGC
AAGCAGTGTATGCTCAACAGCTCCAAGGACCAATGCCAAAGGTTTGTAGCAGCAGTACTTTAGTGTAACCAACGGACTCG
CTAAATGGGCCCTACGCATAATTTGATCCAGATGCCTGATGGAGCTGTTGAGAACTTGAGATCATAGCACCTCCTGACCC
CACAAGCAACATCGGTAGTGGACATCTCGCCATAAATAATCAACAGGTTCAAAAGAGATAGAGCCCCAAATGTGTATCTA
TGTCATGTACTACAGCATGAATCTATAGCTCTCATGTACTGCTCTGCTTCAATAAAGAAGGCATTCAGTCGGTTGCAAAC
AAACCACTGGTTGCACTAATTACCGAATCACCAGCATCAGATACAATCTATGTTGAGCTATAATGGAGCCTGCGTTGCCA
AGTACCTACAACTTAAATGTTCAGAATCAGTCATTCAGATGAATCCAAATCTCCAGTTGCTTTGCAAAGGCGAACTCTAC
GACATCCGCAACGTACGAGGCACATAAATTGCATTTGCAATTTGTAGCTTAAAATTTGAAAAGGAGCAATTGCAAACAAC
ATCACAGCCTTGCAGGCTGAGAACGTTTTACACCTAAGTTGCTACCGCGACACGATCGTAAATTCGCAACATGTGAATTT
GCACTGCACTACACTTTCACGAAACCCTAGCACCGCCGGTGAAGATCCGCGTACCTCAATGGGCTCAGATGCGGTTAGGC
CGGACCCAGAACAGCTCGCGGATGACCGCCGCGACGATGACGACGTTGGGCACGATGGTGAGCACCGCCCCGGCGATGGA
GTGCGGCGGCCGCGCCCTCATGGGGCCCCTCTGCGCCCGCTGCCGCCGCGCGTAACCCCGGAGCTCCGCCTCGCCCCACC
GCTCCGGCGCCGGCTCGATGGCGGCGGAGGGCACGACCGGCGGCGGGAGCTGGAAGGGGCACCGGGACCGCCACGACGAC
GGCGGGAGGCATAGCCTGGCGGCGCGCGGGAGGAACACGGAGGCGAGCGCCCACCGGAGGAGGCCAGCGCCGTCGCCGGC
GCCGGGGCAGAGGAACGGCGGGTAGGTGGAGCCCGGTGGCGGGCACGGCACGCGGGACGCGAGGAAGAGCTGCGAGTGGA
GCGACGGGGAGTGGGAGGGGTGGGTCAGGATATGGGTCAGCGCCTCCACCCGCCGCGGCCAGGTGGGGCTAGTGCTGCTC
TGGGGAGCTCGGCATCTAGCTCTCGGCTCCGCCATGGCGGATGCGAGAGGAGAGGTCGCCGGAGGCGGCGTGGCCAGCGC
ACGCGGCGGCGGTTTGCTTGCTTCCCCGGCGAGTGGATAGAGTTTGATAAGCCCTTGGGCGTCGCCGTGTATACTAATAC
GTATACTATAGATTACGCCTTTCCATTTTTTTTTATTTCGGGGCTCATAATGGGCTGCGTTTGAGTAGCCCGCTGTCCGG
ACTCCGGAGACAAGCTATGGGCCTCAAAGCCCAATATTCGAACAAATTTCCAAAAGCAAACCTTCCAAATACTCCCTCCA
TCTACTTTTGGTAGTCATATTTCATCTTGGCACACAGATC