miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0000671
Located between position 30326086 and 30326291 on chromosome 06 strand -
mature miRNAs for MI0000671:
         osa-miR166b (MIMAT0000636): TCGGACCAGGCTTCATTCCCC

References
[1]Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP, Genes Dev. 16:1616-1626(2002)., "MicroRNAs in plants"




>promoter (3kb upstream pre-miRNA, by PMRD):
ATTACACCCTCTGAGACCCAAAAATAGCCTAATGTTTGTCATCATTACACCCTTGACCTTGAGACAAAGACATGTATGTA
TATATATATTCAGAAAAGCATGATGATGATGTATGTATATAGTACACGGTTGCTGTTTGTGTAGCATTTTCTGAGTTACA
TGTTAGTAGCATTTCTGCAATCTCCCTGTATATGTCTTTGCCATTTCCTTTCCCGGCCAGCCTAATTTAATCAACAAATT
CCCCAACATCATGCACATATGTATGTGCGTGGTCGGTACGAGTGGAACCGGCAATAATAGATACTCCCTCCATCCCAAAA
TATTTGACGTTGTTGACTTTTAAAAAATGTTTGACCGTTCGTCTTATTTAAAAAAATTAAGTAATTATTAATTCTTTTCC
TATCATTTGATTTATTGTTAAATATACTTTTATATATACATATAGTTTTACACATTTTATAAAAAATTTTGAATAAGACG
AACGGTTAAACATGTTTAAAAAAATCAACAGCGTCAAATATTTAGGGAAGGAAGGAGTAATAGCTAGTATCCTAATATCT
GATATCAACAAGTTGAAGTCGATTAGAGAAATAATTATATCTCTCTGCATATTAAAGATTTAAAGTCAGCGAATGCTGCT
ACCTTGTTTCAGGCTTTCAGCTAGCCCAAGTGGCTCTCCGTGAACATATCAACAAGGAACTGACAGAAATGATAGATTCA
AAGGTACATACACATAGTGGACTTGCAAGGACTATATATGAACAACACATTGTATATATACATTTGATTAATCTGTTCGT
CGGCATCGTGAGTTTTCAGCTGAGGAGAGATATCTAGCCTACTAAACCCAACCTGATCCAAGCCCATTGTAAAGAAAGAA
AACAAAATCAACTTTACACCTTTTCACACAAGAGTTCAACTTATGCAACTGAATTCTCTTAGAGTCAAATTAATTACACA
TATGATACAAAGCCTCATGTTTGTCAAAATTACACCCCTAGGACAAAGACATGTATGTGTGTATATTATATATAGTAAGC
CCGAATTCATCTGCGCCGTCCGTGTGTGTCAAGATGTGTGCTGCTGAATCTTACCTTCCACCCACAAAATGAAGGACTAC
TATATGGGGAAGATTTGGAAAGGTACACAAGGCCAGTTAATTTTTTTCTCCCTTCCAACATTGCCCCCCATCCTCCCACA
CATTAGAGACGAGGAGTCACTGAGTCATGCTTGCCGGCAGGGGTGGTGCCGAGGGAATTAAATTTGAAAATATACCGCAC
ATTCAATTTTATTTCAGGAATATTCAGGATGTCGATCTCGCATAACCATTGAGCGAAAATAGCGTAGACGTGACGTCGAG
GGCGGTATCGCGCGGCGAAAGCCGCGCGAGACCGCGCGCTCTCGCGGAAAGAACGAGCGAGACCGAACGGTATCGCTGAA
ACAAAGAGCGACACCGATTCCTATATTTTTCATGCGATCTAATCAAAAGATCGTTCATGTGTTTTTATAATCGTCCATTT
TATACTTGCATTCATGCTAGAATTTACCGTTATTACAGCGTAGGCACCGTAGTAACAGTGAAAATCACAGTAAAATACTG
TTTATAGGTGCTGTGCTGGAACGATCTTGTCCATTCATTGTGAAATCAGATGCCTAAAATTTTCCCAATTGCTCTAAAAT
ACTGTTTAGAGCAATTTTACTTGTGTGGATTATTTTGACATGTAATTTACTCTAACATAAATTACACTCACGGTACATGA
ACTTGTGTGGTGGGTGCAAATAGATACAACAACTTACAAATTGCTCACTTTGATATAATAACTTGGCTAGTTGGTGCGAA
CTGGGCCAAAATGATCCACACAAGTAAAATTGCTCTAAATTAGTGCACACTAATGACATAACAGCATATACATATAACTG
TGATTTGGAGATCTTATTTCGAATCCAAATAAAAATGTGCAAAAGTTTATTTTTCATGTCCAGGGTACAATATTTGTTTC
ATTTTTTGGAAAAATTTGATCATCTATATAACTCGTCTAATTTTTATTTGTCTGTTCAAGACCAAGACAATTGTTATATG
TACTATTAACTACTAAAAGAAAATTTTAATTTTCATGTTCATGTTCTGACACTTTCATTGAAAGTGTATTTTAACAATCA
GGTATTTTTAATTATTTTGCTTTTTCGTTGGTCTAAATCTTGAAAGTATCATGCGACTAATAATATGTGTCAGTAAAAAA
TTTTGATGTGTAACAATAATTACACACTAGTACGTATCATATTACATCAATTTTACTTGTGTGGATTGGTTTGGCCCATC
TTTGCATGAACTAGCCAAGTTATTGTACCGGAATAAGCAATTTACAAGTTATTGTACCTATTTGCACCCACCATACAAGT
TTATATATCGTGAACGCAATTTACTCTTTTCCTTGAATACTTGGACAGGCAACAGTAGTATACTAATTTCTGATATCAAC
AAGTCGCAAGTCAGAGAGATCGTTGTATTATATTTCTCTGAATATTAAAATTAAAGTCAATGAATACTACTACTCCTACT
TTATTTCAGACTTTCAGCTAGCCCGAGTGGGTCACCACGAACATATGGATGCATACATAGTCAAGAAGGAACGAACTGCA
ATGACAGATTGAAAGGCACATATGATCTGCAAAAGGACTATGTACTGTACGATATGAAAAAAAAAACAGCCGTATGTTTC
AGAGAAAAACTCTGAAACTGGCCGCCGTTTTGCTTTGCCGCCGGTGGTTTCCATTGATAGAAGGTCATTATTGTTTCATC
AGAGATGAGAATCAAATCAGTAGCGGTAAATAGGAGTACATATGTATGATTAAACAAAGACTGAGTTGCCATTGCTTAAT
CTGACTAACAGTATACACATGCATACCATGATGTTTTAAAGGATACAAAGAAACCATTTCTGTCTGAATCAATTAACCGG
GTTCTCTGAAATCATCGACCAATGATGTCTTAAGCGAATA