miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001144
Located between position 25293034 and 25293178 on chromosome 03 strand +
mature miRNAs for MI0001144:
         osa-miR166i (MIMAT0001074): TCGGATCAGGCTTCATTCCTC

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
TTTCTGTTAATTAGTTTTGTGCCACCTCGTATGCAACCATGGGGGATGGACGATTCTTTTGAATAATGGGGTGTGGCTCT
TGTATATGAAGATATCTAGGCAGTATATCATATCGATGGAAGGTTCAATCAATAATTAATAACGGAAAAGGTTTGTCTGG
TCCATATAGTGGTACAAAGAAACGTTCTGGATTTTCAATTTTTTTTCACTTCCATTTTTAAAAATTATTTTCAAGTATTC
CGTCTTGTCTTTCATCATCACTGGGAAAGAAAATGTAATATAAGTATTTCTTTGTCCAGAGCAGTATTTCGTTTTTATTG
AACTGTTAATTTTTTGAGTAAATTTCACAAAACGTGAACTACACGTTTTGTGATCTACGTTGCAGAAAACCACTTAAGTA
TATATATTTTGGTAGTGTAGTTTCACAAAACCACACTATCAATGAAAGGATTCACTCACGAGATGACGTGGTTGTTTCAC
ATAGGACGAAGACGTGGCATCCTATTACCAGCCATCGCACAAAATTAATAGGATATGCCACGTCATCACACGGATGAATC
CATTCATCGATAGTGTGGTTTTATGAAACTAAACTACCAAAATACATGTACTTAAGTGCAAAGTGTTAAAATATGTGTGG
TTTTCTGCAACTTGAACCATAAAACATGTAGTTTTGTGAAATTTACTCTAATTTCTAATATTCAATTGAAATGTCTGCCA
GTAATCAGTGGCATATATATGTGCTCTGTTGTTCTCCTTGGTAAAAGTACCTCTGCAATATATACTCCTAACTTATCCAT
TGTCCAATATATAAACAAAAACAAGAACTGAGCAACTGACCTAGCTCTACAAACATAAACAATAAGTAGTCAAATATTGA
TGTTGCTGTGTGTAATATGATATTCACTATGGATGCAGTGTTCACAAATTAAGGTGCCATTTCTAAAGACTTCATCTTCA
GTTGGCTGCGAAATTAAATATGTTTGCTTAAAATACTGTTATTTAAGGATCAACTCTCCGTGGATAACAAAAGACTGGCA
ACTGGAATAAGAGATACAAGTACTAACTTATCAACAACTAGTATTCGTGCATATGCAACACACGTCTCCGCAAATACATT
AGTAATATAATGATTTTTGAATGGAATGCACTTATTCATTAATTATGATATTTTTTCTTTATATCGAACAAAATCACAAA
AAGAAGACATAAACCACATATATACATATATTAGGCATGCTATTTTGAAATAATTTTTACAGAGTTTAATTAGGTGGTGT
TCTTTTCTCCTGAAGATAAAGATGAAGATGACGCAAAACGAGGTGATATTAACGTATGATTGATTGAGTTTTAATTATTA
CAAACTTGAAAATAGATTAATATGATATTTTAGAGCAACTTTCATATAGAAAGTTTTCGCATGAAACGCACCATTTAGCA
GTTTGAAAAGTGTGCCACGAAAATCTTTATGTTCATCCAACTCTTGTTGTTGAAAAGAACGGGACCTTAGACATGCTAAT
TTCACTGATGCTACACGGATCGGCAGATGAGCTTAGGGATGTCAACAAACCGAGCTCGAGCAAGCCTGCCTGCCAAGGCT
CCAAGCTCGAGCCGAGTCTAATCTGCCTTCAAGCTTTTAAGCAGGCAGGGCTCGAGCTCGGCAAGGCTCGCGAGCTCGAC
AGAATATAAGATAATGTATATTTTGATGATAAAATTCTATAAAAACAATAATTTTAAATTAATAATATTGAAGAAAAAGA
TTATGAAAACCTAAGATTAATACTCCTATATGATATCAAAATATACTAATTTTTCACATGAATATATATAATTTATCCTT
GAGCTATGAACTTATATCATATAAAAAATAAAAATTACACGTAGTTAGGCTCATGAGAAACCTGAGCTCAGCTTCACAGA
GCTCGATCGCAAGCTTGCAATTAGGGGGTTTAGCTCGTTAAGAGTTTGAACCGGGCTCGATTCGAGTCTGAGACGAACTG
AGCTTGAGCAGCCTCGAGCTTTTTTAACAGCCCTACATGAGCTGCACAACTCTTTGGTCGTTACCTATATACACCAAACT
ATCTGTACACCCAAATGTAAACACAAAAAATCCCATCCAAAAGAAAGAAATGCCCTGTCAACCACTTCAACTACTTTGAC
ACCTATCAAATACAAGGCCAACATTGGCTGAGCCAACGATGTAGTCGAGGCTCTAGACATCTAAATAGATTTTACTATCT
GACAACAATTTCTCATAATGATTTTTAATTACTACACATGATAGTCGTCCGATCAGCCCGGGAGCTAGCTAGTTTAGCCA
TTGAAAGACCAGATGCAACAATACCGGATAAATCAAACACTTTCTTTCTAGAGAAAAATTCAGAAAATGCTCACAAAAAT
TACACGTCGTCTAACTACACGTATACACCTATATATATAGAAGAAAAAGAAAATCAAAAGTATTAAAAGAAAATCAGATG
ACATCGACGTAGGAGGAGTCGCAGTAATCATCACCGTTGGTCGCGTCGCCGTCGGGCTCGTCGAGCAATCTGGACCCTCC
GATGTCGAAGCGCTCGATGGCGGCGCCTCGCGCGAGCACCTCCTCGTCCTTGTCGTCGAAGCCGACGCAGAACCTCGCCG
TGAACTCGCGGAGCGGCGCCGCGCCGCCGCAGCCGGCGAGGATGGCGAGCAGCTCCTGCCTGGGGAGGTAGCAGCGGTCC
AGGCACAGCGACCGGAGGCGGCCACGCAGCGGCGACGCCGCCGCCATGGCCGCGGCGTCCTCGGGCTTGACGGAGCCGGA
GGTGACCCTGAGGACGGCGAGGTCGGGGCAGTGCAGCGCGAGCGCCGCGGCGACGGCCGGGAAGGAGGACGGCTTGGAGT
CGAGCTCCAGGTGGGTGAGGCGGCGCCACCGCGGGAGGAGTGACGGGAGGCGCGCGTCGTCGGCGGGGGGGAGCTCGGGC
AGTGCGAGCCGCCGCAGCGCCGGGCACTCGGCGGCGACGT