miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001107
Located between position 32429134 and 32429260 on chromosome 02 strand -
mature miRNAs for MI0001107:
         osa-miR166k (MIMAT0001037): TCGGACCAGGCTTCAATCCCT

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
CTTATATAATTCAAATCGATTTTGCTATATATTTGTCGACAAATTTTTCCCCCAAAATTTGACAGATGTAATTACAGTAC
AATCGTAGTGTAATTACACTGTAACTTGCATGTAATTACACTGTAACTATAGTGTAACTTGTATGTAACTTTCAAAAATC
TCTCCGTTACATGTTATTTCGGTAAAATGGAGGTCGTGGGAACAAATTCTTTCACATATGTGTGTGCTATGATTTGTTTT
CTTTCTCACCAAAACAAATCTTGTAATAGATCCAACGATTCAAAATTATGTGAAACTTACATATAAGTTACACTGTAGTT
ACATGCAAGTTACAGTGTAATTACATATAAGTTACAGTGTAATTACACTACGATTGTACTATAATTACATCTATCAAATT
TTTGGAGAAAAATTTGTCGACAAATGTATAGGTAGTCCCATCATGGGACTAATCAACCTGCATTTATACACATGGACCAA
ACAAATCTTTGTTGGCTGTGTGTAAATCTTTATGGTTTGTATAGCTAATGGCAGATATTTGGTGTACTATGTACATTTAC
AACGTGTCGTGCCCTACGCGTACAAATTTAACTACAAAAATTATCCTACTTGTTTATATCTCAGTGCACCATTCTTAGCC
TAACGATCTGATGCAGTGAGGTGCTCCCGATCGAGTGGTACTTGACCACGTCCTCGAAGCATCCAATGGATGGCGGCGAT
GGCGGAGGTGGCGCCGTCGCCGGCGCCTTCTGCATGTGGCCAGGATCGCATTCTCCTACGGTTGCCGCCGCTGTCGACGT
GTCGCTGACCGCTTGCGTGACATTGACAATGTCGTCGTCGTCGTCGTCCTCTTCCACCGGCGACGGACACGGGTAGAAGT
CCTTGCTCTCGACGAGCTGCATTGTCACGCGCCCGCCCCGGCGGCGCGCGCGGATGTACTCGTGACGCCGCCTGGCGCCG
GCGGGCGCTTCGGTGACCACGAGCCTCCCGTCTTTGGTGCACGTCCGCCTCATCGCGCCCCGGAGCGACGGGAGCGGCGG
CGGCAGCCGGCGCATCATCCCCCGGCGCCCGTACGCCACCCAGCACCCGTCCTCGCCGTCGTGGACGTCCTCCTCCTCAT
CATCATCACTGCAGCCGTTGCACTGATCCCCCTTGCAGCTCGTCGTCGTCTCCTGGTGAACCGCGACGATCGTCCGCGTC
ACGACGCGGCCGCGGCCGTAGCCCGCGGCATCGGCGACGAGGAGGGATCGGAGGCCGAGGCTGTCACGGTCACGGGCACG
GCAAGGCAATCTCTGCGCGGGCATCGATCGGATCGGTGTATCTGGCTCGGCCGATCGATCTCGGCGCGAGCCCCGGGTTG
ACGCGGAATTTATACGTGGGGGCGGAGGAGGAGGAGGACGCGTTTACTTTACTCTCCGAGATGGCAGGAAGAGGACAGTC
GCGGCGCCCGTGATGCCGACCTAATTAATAGGCCACCGGCCCGATCGACCGAGCAGTCGTCATCGATCCACCGCTTCCTG
ATCTGGTTTTATTTGATTACGCTGCGTTGGAGCTTATCTTATCCGTCCATTCGGTTGTTAGATATTGCTGCGGAACGGAT
AGAGGCGGATCGGACGGCTGTGAAGCCTGTGCTTGCACGTACTCCCTCCGTCCAAAAAATCTCAACCTAGAACTGTGATG
GGACATAATCTAGCATGTCTAGATAAGTTGTACTAGATTATATCCCTTTATATCTAGATACGTTGTACTAGGTTATGTTC
CATCACAGTTCTAGGTTGAGATTTTTTGGGATGAAGGGAGTAGTTGGCAAGATTGGTATACGGCGCATGGTGAGAAAGGT
AAGGCTGATCTTTAGTATTTAGCTATGGCCTATATACTTATGCTTTTAATTATAGGCCTTGCTAACTTCCGCTATATATG
CATTGGATTGCTTCAGCCCATAGCTAACTTCCGGCTCAGAATAGTATATGGGCCTGAGCTAGAGTGAGGCATTTTTTTTG
GCAAAATTTGCTACAGTACACTCAAAAAACGTGTAATTGGCTGGGAGACACTGCAAAAACGAGACACGGCAAATGGACAC
TACAAAAATTATGTAATTGGCTATAGGACACCAGAGAATATTTTATAATATCCGAATCAAAAAAGGCGGGAAATTTTTCA
AAATGGCAAGATTGCCCCTGGCTCCATCTTCCTCCACCTGAAATCACACACAAAAAAATAGCAGGGAGCAGCCGCGGCGC
GAGGTTGTCGACGGCGAGGGAGCGGGTAGCGGCGACCGCGCGCCAGGAGCGGCCGACGGCACGGAGGCGGACGCGGTCAG
GGAGGGAGCGCGAGGCCGGCGGCGTGGAGTGCGAGCAGGAGGCGGCCACTGTCGTCACCGTGGTTTGAGCGGCCATCGCC
GCAGCCCAAAGCGCCGATGCCTCGCCCTGCCGTTCCTCCTCTGCCGCCCAACCATACCACAGCCACCACGTGTGAGCGTC
GCCGCCGTCGACCAATCCATGGACAGAGCTCCACTTTTCTCCACACAAAACCGATCCTCTCTCTCTCTCTCATGCCGTGT
CAAGCCAGCCGCCAGTCGATCTCCTTCCTCGGAGCCTCACCAGCCATAACCTCTCACCATTAGCCTCGCCTCGCCGAGTA
GAACCATTTCATCCATTTCCCCTTTCCCTTTGCCACCACTTTGAACCATCCACCCAACCTCTCTCTCTTCCCGATTCACG
GCCTTGCACTCGTCGTTCCGGCCATTTCCCTCACTCCCTCGACCTACTACCACCCTCCCTTGTTGTGCCGCACTCGGGAA
CATACTCCGCCGCCAGCGTCGTCGTCTCCCGGCCACCGGAGCACCAGCGCCCTTCTCTACCTCCTCTCGGTTCCCTGGAA
AGAGGCAGAGAAGAAGATGACGGGAGGAAGAAGAAGAGAAAGAAAAATAAAAAGGAGTAGAGAAGGATTGAGAAAAACAA
AAAGAAAAAAAATTGAAGGGTAGAACCATACTTACACGGT