miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0001116
Located between position 27330559 and 27330664 on chromosome 02 strand +
mature miRNAs for MI0001116:
         osa-miR168b (MIMAT0001046): AGGCTTGGTGCAGCTCGGGAA

References
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"




>promoter (3kb upstream pre-miRNA, by PMRD):
TTCCTTCTTCCTCCTCCCTCTCTCTCGACCTTCTCTCTCTCCCGCGGTCTCTCTCTCCACCTTGGCCAGAGCAGTGGCGG
TGGCGGTAGGGAGCGACGGTGGTGGCAGACGATGTCGGAGCACTGATCGCCGTCGTACGACCAAAGTAGCGAGAACACGC
AGGACGTGGAGAAGGGGAGAGAGAGAGTCATCCCCGTCACCGCCGGTGCCGCCGTCCTAGAGATCCCTCGCCGAGCTCCT
GTCCTGCCACCACCGCCGTCCACCACCGCCGTCCACCACCGGTCGCCGTCCCGTGCTCCTTCGCTATCCCCGGGCGGAGA
AGAAAGGAAGACCGGGGAGAGAGGGGGGGAGAGCCATCCGTCACCACGAGTTGCGTGGCCCTGGAGCGTTGCGATGCTAC
TGCTGGCTTCTTCCTGCGATGCTACTGAGGTTGAAGAAAGCCTCTGTCTAGGTAATTCTTTTTGGGTGTAGCTATATGTA
TGGCGCTATATTTTTCATCAAAAAATAGTCGGTATGTATTTATATTGTAAGTCCCTAAATTACATACGTAATTTTAGTGT
ATTTACAATGTAAGTCTTAAAATTACATATGTAAATTCGAAAATTACATACTATTACATATGTAAGTGGGGTGTAAATGA
GGTGTAACTACTGTGTAAGTGGCTAAAAAAATCGATTGTAGCATATGGCGCCATATTTCTAGCAACTCCGTTCTTTTTCT
TCTTTTCTCTCACTCACTCCATCAGCTGCTAGCTTTGCTAGCTAGGAGTAGCTAGCTGCTTGTGCTCTTGCTGTCGAGAG
GAGGAAGAAAGACTCGAGGTGGTTGGCTGTCATGTTGTGCATGGCTACATTCAGAGCCCCGACGGTGATGTCATCGACTG
CGTGCCGCTGCACCTGCAACCGGCGTTCGACCACCCGAAGCTCATTCATTTTTGTTTCGATTTGCAGTGATCGTTTCTAT
CTCCGGCGACGTTTCTTGATCGTGTTTGTGACTGTGTGCGCGTGCAGGTTGAGCCGGAGCCAGAGGAGAGGCCCAAGGTC
GGCGGCGCGGCGGTGGCGCATGGGGAGGCGGCGGAGGAGGAGGTCGTGTTCCCGATGGCGTGGACGGACGAGGACGAGTC
GTGCCTGGAGGGGACGATGCCGATGCGGCAGACGACGAAGCGAGACGTGCTGAGGTCCAGCTCCTCTCTCTATTTCAGGA
TGAAGCAGCCTCGTGCCTGCGTGCCGCTGGTGTCGTCCGCGTGAGGAAGAAGATGGGATGGGGGTTGCTAACAGGTGGGG
TCCATAAGCTGACTCAGCTAGTTAATGGAGGAGCCACCGCCACGTAAGTGCCACGTAGGACAAAACCGCCTCCGAAACCG
CTGAGGGAGGTGATTTCCTCTGGTTTTCAGAGAAGAAGGAGGCATTATACCTGGTTTTCCGGTTGAGGGATGTTATTCAT
CCAAGAGCAAGAGATGAGGGAGGTAAAATGGACTTATTCCTTCTGCCAACGGAGGTGTGTCGTGTTCTCTCGGCCGTTGG
TGAAGCCATCTGCTGAAAGGAAGCCCAAGAAAAAGCTGCAAACCTGGGCTTGCGATGGGCCAGAAAATTTTCCGTAGTCG
CGATGGGCTCAACCGCTCGAGACCGAAGGGTCTAGCAATTTTGGGAGGCCCAAGTAGAGGAGATGGAACATGGAAGGAGG
ACACTAGAAGCCGATGGGTTACAAGGTCTTCTCCTCCCGCTCGCCGGCTCCTCCTCGCACCAACTCCGGCGAGCGCGGCC
TCGCCGCCGGCAGCGGCGGCGGAGGGGGTGGCATGGACCGGTGGACCGGTGTCCTCAACGTCCCGCTCTCCCGAGGTGGC
CCTCCCTTCCGCGTCGCCGCCTCGCTCGTCCTTACTCCGGCCAAAACCCTCGCCGTAAGCCCCAATCCCCTGCACCGTCG
TCTCCTTCCTCGCTGGCCCTCTCTCTCTCTCTCTAATCCGAGGCCTGATTCTGCCAGGTCCCATGCGCCAACGCGATTCT
CTTCACGGGCGACCGCGTCCGGGGCAGCGGCGACCCGGCGATCGAGCGGCTGTCGGACGCCGCCTACCTGGCTCGGCTCC
TCGCCGGGAAGCTCACCGGGGAGGCCAACGCGTGGGTGGTGGATGCCGCCTGCTTCGCTGGTTCGTTTGCAGTTTACCGA
GATCTCGTTCCGTCCGTGGACGCCGTGGGCGACCCCGAGCGGTATGATCCCACTGGCTTCCCGGCGGCGGCTGGCGTTAC
CATCATTTTAGGACATTGCATTCGTGAGGTTTGGTAAAATTCTGTAATTTCTCTATTCTTTTATGCAATTAGAATCATTA
CAATCAAGCGTTTATTCGAATACTTTGTACTTGTATCTTAATATTTCCGTAGTAGTATGTTTAGATACTTACATATACAG
GAGTACCATTGAATTACTGATGCAATCGTGAATTCATGAGGCACATTATTCATCACTGGTTTCAGTTATAGTTAGTATAC
GATGCTACAATAACTGAATTCTTGATATTTTGTTAATTTTTGGTTACCAACACAGGAATTTCGCGCTAACATTTTTTTTT
GTCAACGTAAGGTTTCAGCCTGCTATATGAATCAGCTTCTCAGATTATTAGTTCACATTTGGTAAAGTAAATATGACTTT
CTAAGGATGACTTGATTGGGTTTCTGGGATGGTGATTTTTGTCTTTCTTGCTTGATTTACCTTTTGACTACATGAGCAGC
TACTACTGTATTTTTTTTTTTTGCTAACGTAATGCTTAGCATATTGGATATATAGATATACTGCCATGGTGCGCTAAACT
TCAAGAACTTTGCTTATAAAATAAATACTTCCTAAAATAGGAGAAAACGAATGCATTATATGTTAGTTTTCTTTTTACTC
CAATGCAATTTCTGTCTTGATAGTTGTTTACCTACTGAGATGTCAATTGTTTATTGCAATATCTCACTATTTTGAGTCTT
CATTTCATGATTTCATCCATTTATCGTGTCAAATTATTGT