Basic information from miRBase |
hairpin accession number: MI0001116 |
Located between position 27330559 and 27330664 on chromosome 02 strand + |
mature miRNAs for MI0001116: |
osa-miR168b (MIMAT0001046): AGGCTTGGTGCAGCTCGGGAA |
References |
[1]Jones-Rhoades MW, Bartel DP, Mol Cell. 14:787-799(2004)., "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TTCCTTCTTCCTCCTCCCTCTCTCTCGACCTTCTCTCTCTCCCGCGGTCTCTCTCTCCACCTTGGCCAGAGCAGTGGCGG
TGGCGGTAGGGAGCGACGGTGGTGGCAGACGATGTCGGAGCACTGATCGCCGTCGTACGACCAAAGTAGCGAGAACACGC
AGGACGTGGAGAAGGGGAGAGAGAGAGTCATCCCCGTCACCGCCGGTGCCGCCGTCCTAGAGATCCCTCGCCGAGCTCCT
GTCCTGCCACCACCGCCGTCCACCACCGCCGTCCACCACCGGTCGCCGTCCCGTGCTCCTTCGCTATCCCCGGGCGGAGA
AGAAAGGAAGACCGGGGAGAGAGGGGGGGAGAGCCATCCGTCACCACGAGTTGCGTGGCCCTGGAGCGTTGCGATGCTAC
TGCTGGCTTCTTCCTGCGATGCTACTGAGGTTGAAGAAAGCCTCTGTCTAGGTAATTCTTTTTGGGTGTAGCTATATGTA
TGGCGCTATATTTTTCATCAAAAAATAGTCGGTATGTATTTATATTGTAAGTCCCTAAATTACATACGTAATTTTAGTGT
ATTTACAATGTAAGTCTTAAAATTACATATGTAAATTCGAAAATTACATACTATTACATATGTAAGTGGGGTGTAAATGA
GGTGTAACTACTGTGTAAGTGGCTAAAAAAATCGATTGTAGCATATGGCGCCATATTTCTAGCAACTCCGTTCTTTTTCT
TCTTTTCTCTCACTCACTCCATCAGCTGCTAGCTTTGCTAGCTAGGAGTAGCTAGCTGCTTGTGCTCTTGCTGTCGAGAG
GAGGAAGAAAGACTCGAGGTGGTTGGCTGTCATGTTGTGCATGGCTACATTCAGAGCCCCGACGGTGATGTCATCGACTG
CGTGCCGCTGCACCTGCAACCGGCGTTCGACCACCCGAAGCTCATTCATTTTTGTTTCGATTTGCAGTGATCGTTTCTAT
CTCCGGCGACGTTTCTTGATCGTGTTTGTGACTGTGTGCGCGTGCAGGTTGAGCCGGAGCCAGAGGAGAGGCCCAAGGTC
GGCGGCGCGGCGGTGGCGCATGGGGAGGCGGCGGAGGAGGAGGTCGTGTTCCCGATGGCGTGGACGGACGAGGACGAGTC
GTGCCTGGAGGGGACGATGCCGATGCGGCAGACGACGAAGCGAGACGTGCTGAGGTCCAGCTCCTCTCTCTATTTCAGGA
TGAAGCAGCCTCGTGCCTGCGTGCCGCTGGTGTCGTCCGCGTGAGGAAGAAGATGGGATGGGGGTTGCTAACAGGTGGGG
TCCATAAGCTGACTCAGCTAGTTAATGGAGGAGCCACCGCCACGTAAGTGCCACGTAGGACAAAACCGCCTCCGAAACCG
CTGAGGGAGGTGATTTCCTCTGGTTTTCAGAGAAGAAGGAGGCATTATACCTGGTTTTCCGGTTGAGGGATGTTATTCAT
CCAAGAGCAAGAGATGAGGGAGGTAAAATGGACTTATTCCTTCTGCCAACGGAGGTGTGTCGTGTTCTCTCGGCCGTTGG
TGAAGCCATCTGCTGAAAGGAAGCCCAAGAAAAAGCTGCAAACCTGGGCTTGCGATGGGCCAGAAAATTTTCCGTAGTCG
CGATGGGCTCAACCGCTCGAGACCGAAGGGTCTAGCAATTTTGGGAGGCCCAAGTAGAGGAGATGGAACATGGAAGGAGG
ACACTAGAAGCCGATGGGTTACAAGGTCTTCTCCTCCCGCTCGCCGGCTCCTCCTCGCACCAACTCCGGCGAGCGCGGCC
TCGCCGCCGGCAGCGGCGGCGGAGGGGGTGGCATGGACCGGTGGACCGGTGTCCTCAACGTCCCGCTCTCCCGAGGTGGC
CCTCCCTTCCGCGTCGCCGCCTCGCTCGTCCTTACTCCGGCCAAAACCCTCGCCGTAAGCCCCAATCCCCTGCACCGTCG
TCTCCTTCCTCGCTGGCCCTCTCTCTCTCTCTCTAATCCGAGGCCTGATTCTGCCAGGTCCCATGCGCCAACGCGATTCT
CTTCACGGGCGACCGCGTCCGGGGCAGCGGCGACCCGGCGATCGAGCGGCTGTCGGACGCCGCCTACCTGGCTCGGCTCC
TCGCCGGGAAGCTCACCGGGGAGGCCAACGCGTGGGTGGTGGATGCCGCCTGCTTCGCTGGTTCGTTTGCAGTTTACCGA
GATCTCGTTCCGTCCGTGGACGCCGTGGGCGACCCCGAGCGGTATGATCCCACTGGCTTCCCGGCGGCGGCTGGCGTTAC
CATCATTTTAGGACATTGCATTCGTGAGGTTTGGTAAAATTCTGTAATTTCTCTATTCTTTTATGCAATTAGAATCATTA
CAATCAAGCGTTTATTCGAATACTTTGTACTTGTATCTTAATATTTCCGTAGTAGTATGTTTAGATACTTACATATACAG
GAGTACCATTGAATTACTGATGCAATCGTGAATTCATGAGGCACATTATTCATCACTGGTTTCAGTTATAGTTAGTATAC
GATGCTACAATAACTGAATTCTTGATATTTTGTTAATTTTTGGTTACCAACACAGGAATTTCGCGCTAACATTTTTTTTT
GTCAACGTAAGGTTTCAGCCTGCTATATGAATCAGCTTCTCAGATTATTAGTTCACATTTGGTAAAGTAAATATGACTTT
CTAAGGATGACTTGATTGGGTTTCTGGGATGGTGATTTTTGTCTTTCTTGCTTGATTTACCTTTTGACTACATGAGCAGC
TACTACTGTATTTTTTTTTTTTGCTAACGTAATGCTTAGCATATTGGATATATAGATATACTGCCATGGTGCGCTAAACT
TCAAGAACTTTGCTTATAAAATAAATACTTCCTAAAATAGGAGAAAACGAATGCATTATATGTTAGTTTTCTTTTTACTC
CAATGCAATTTCTGTCTTGATAGTTGTTTACCTACTGAGATGTCAATTGTTTATTGCAATATCTCACTATTTTGAGTCTT
CATTTCATGATTTCATCCATTTATCGTGTCAAATTATTGT