miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0008281
Located between position 4850453 and 4850673 on chromosome 10 strand +
mature miRNAs for MI0008281:
         osa-miR1884b (MIMAT0007832): AATGTATGACGCTGTTGACTTTTA

References
[1]Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C, Genome Res. 18:1456-1465(2008)., "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"




>promoter (3kb upstream pre-miRNA, by PMRD):
ACAGGTGGGGCCCACCTATCAGCCCCGTCCCCTACCTCCGGCCGGCGCCGCCCGCGCCCGCAACCGCCGCTCCCGCCTCT
CCCGCACACGCCCGCGCATGTCGCCCACTCCCCGCACTCGCCCCGCACGTCCCGCAACTGCTGCCCCTCACCCGCCCATG
CGCCCCACCGAGATGGCCGGGATTCAATTTTTGAATCCCGCCTCTATCTCCTCCCCACCTCCCCACGTCGCCGGCCGATT
CCCGCGCCTCTCGGCTTCATCTCGCCCCCTTGTGCCTATAAAAAGCAACCCCGTCCCCTCCTCTACCATTTTCCCGTTCT
CGTCGAGCTCTCCCGTGCACTCCACCACCCTAGCGTCGCGCACCACCCGCTGCCGCCGCTTCAGCCACCTCCGGCCGCCA
CTCGCCGCCACTCGTTGCCGCTAGAGCCCCCGCCGAGCCTCGCCGTCGCTGCCGTCGGGTTCACAAGCCCACGGGCCACG
CCGCCCACCCCTTCCCCGTCCAATGCCGCCGCCGGAGTCCGGCTTCCACCGTGCGCCGGTCAGCTCGCCATTGCCACCTC
CTTTGGCCGGCGATTTTGCCCATCTCGCTCCCTCTCTCCCTCTCTAATCACACTCATTTGCTTCCCTAGGTTACCCCGGA
GCCCGTCCCGCCGTAGCCGTCGCTTCCCGCCGCTCACCGTCGTCGATCGCCGTCGGTGAGGCCCCTCCCCTTCTTCCCCT
CTCTCTCCCGCGCCGCCTAGCGCTGCTGCTGCTTAACTGCCAAGCCTCCGCGCCGCCGCCTAGCTGCGTTGCCGTTGCTC
GCTGCCGTCGGCTGCGCCGCCGCCTAGCCGTGTCGCCGCCGCTCGCCTCCTCGGGCCGCCGCGCGCCAGGGCCACCGGGC
CAGCTTAAGCCGCCCGCGCGTGCGCTCGGCCGTACGCCGCCTTCGCCGTCTGATCTACCCTCGGGTAGATCGGGGCCATC
CGTTGCCGCCCGCGTGGCAGCCCACGTGGCCGCCATGTGTGCGCCACGTGGCGCTCCCCATCCCCGATCCCGTGGACTCG
GTCCACTGTGGACCAGCGGACTTGAGCCGATGACTTGTGGGGCTCGCATGTCGGCGCCCCCCCCCCTTCGCTGACGTCAC
CAGGGTTAATTATTGTGCAATGAATCAATTAAGTTTTTTCTTTTTATAGTAAAAAAACACAGTGAATCTTCTAAAATTCA
TAGATAATTCATCCGTGCTCTATAAGCCATTCAAGTCTCAGTAAATCAAGAAAAATTCAAAGAATCCAATTAAAATGGTT
TTGTTCTCTATTTCAGTAGTCTTACAGCCTGTTTGCATTGTTTGCTTTGTATGTCGCATAGATTCCGACTCTCCCGACGC
TCCAGTGTACTTCGAAATAGTCGCCGAGGTTCCTCCAGCCACAGAGCAAGGCAAGTCATGATTGTCACTTGAACATGTTG
ATCCCATATTGGAAATGCTCTATTGCTTTCCTTTAAATATTGCATTGTTTTATAATGTTACCATGGGATGATTACCTACT
GTCTCAGCCATGCATGTTATTTGATACCTTTATACTTTGCTAGCTTGGGTTGTAACATGATTAGATGTTGGATTAGGGAT
TGCTTAGCCATGCCTAGTTCAACTAGTACACAATGGGGGAACTACATTAATACATAGACTTCAGATTCTAGTATTGATGT
TGGATTAGTGCCACCGCTTTGGTGTTGGTTAACTAAAATATATTAAATGGTGGGCTGTGGGTGCATGGCTTTGATGGTCG
CGCCCATGGCAATTAAGGACCGGTTCGCGGGATGCCCTGGAAGAATTTATCGTACTTACCACAAGCCAGCGTGGACAACG
GCTGGGCTTGTAGTGTAGCTTTCCTCTAGCTGACGCATCCAGGCAAGGGTAGGCGTGATGGAGCGGGATGGGCCCTGCGA
CGGCCTTTGGTACTTCCGGATTCACCTAAACACGAGAGGGGACTGCCCGCTGCCTTGCAAGGAGTGGGGGTGAAACCTGA
GGTATGGTGTGTTTGGTTAGAGGGGGTTATGCGAAGGGTCCTATCACGGCCTCTTTCCAGTATGCCGTGGTGGCATGTCG
GCGCACGGGAACGTGTCGTGGGGCTGTGTCTTGTGGGTACAGTTGTACACCTCTGATCAGAGTAAAACTATTCGAATAGT
CGTACCCGCGGTTATGGGCGTTCAACCAGATTCAACGTAATTAGTCTCACCCTAGTTTAGTCTAATGGAACTGATTAGTT
CAGGTGGTGGTTTGGGCCTGTCCCAATGTGGTGTAGCGTTGAGCAGTGGCTGGTTTAATATTGGCTAATTATCACAACTG
TTTTACTGCTTTCAACTACTGTTTATAAATGCTAGCTTTATGCAAATGAACTCCTTTAGCCTCCTTTGGTTATATCTTGC
ATCATACCTCCTCTTCCGGTATGACTTGCTGAGTATAGTGGGTAGTACTCAGTCTTGCTCTCTCTTCTCCACACCAGAGC
TGAAGTTCTTCCCAGTTGGAGCCATCCCGAAAAAGTTGGTTTTGTCGCTGCCATCAAGGATGCCTGTGGAATGAAGTCAC
CTGCTGTAGGAGTCAAGTCTTCAGGCTTAGCTCGCTTTTACCTTCTCTGCTGCATTTGTAATCTTTTATATTTTTTTAAG
CCGTGGATATGTATGTCAACAATTGTTGTTTGTGTACCCTAGCTGGTACTGGACAGGGGTTTAATGCACATTTAGCTTAG
AAATTATAGTTCATTAATTTCTGGGCATGAAAGTGCGTAGCCCCGTGAGCCGTCTCGGCGTGAGCAGTGTCGACGTTTGA
TGTCGCGATTCCGGTATTTGCATAGTATGGGGATCGTTGGTATTAGGATATATGCGAGACTTAGGTAAAAGAGACAGAGG
CGAGGATTTTTCTACAGGTTCGGGCCCTAGAATTGTCAGGTAATAGCCCTACATCCTGTTGGCCGAAGCCGGTCGTTGCT
CTTATTCACCATAATCACACCAGTACAATATTTGGGGTAG