Basic information from miRBase |
hairpin accession number: MI0010552 |
Located between position 10113734 and 10113836 on chromosome 12 strand + |
mature miRNAs for MI0010552: |
osa-miR2092-5p (MIMAT0010048): CAACTGAAGTCGGTGTTTACT |
osa-miR2092-3p (MIMAT0010049): ACCAGCATTCCATTGGCAGAGG |
References |
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds" |
>promoter (3kb upstream pre-miRNA, by PMRD):
GGCGCCGGCGTCGGGCAGGGAGGGCTGCGCTCCACCCCCACTGCTGCGCGCTAGTGTGAAGATGGGAGAGGAGACGTGGA
AAATATTACCGAACCGTTTTTTCAATAATGGCAGAGGTGGGTAATTTTTCACTCAAAAGCGAGTGCAAGCAGGGGTAGGG
TGTGCTTTTGGATTTGTAGTGCACTAAAAGCAGCTTTGGAGCAAAAGTACTTATGGCTTTCGGGCCGTTTGGTTGGCTTT
TGACTTTTGCAAAAGCAAAAACAGGTTGAGAAGCCCAACCAAACACACCATTAGTTTCACTAACATAATAAATTAGTAAA
TCTGAGAAAATGTCTTCTGCTAATTATTTTTGTACCGAAAACACTAAAATTTTAGAAAATCATAGAAAATTAATTTTAAC
TCTAACTGAGGTGAACCAAATTTTGTTATATTTATAATAATTGTATTTTTAATATTGCATACCCGAACTTAGCATCACTG
TTTTATAAAATTTCACTAATTTAAATTTAAATAATAACCTTTTGTATTTATCGTACTTAAATAATTAAAAAGCAATAACT
CGCATGTACGACATCGGATTAAGACTTTTCCTTTTCCCATGTTCAACTAAAATCACCCTCTACATACTGAATTGTTCACG
CATCTAATATACACTCAACTTTAGTTTACATTTGCTAGTATACAGTTGTGTAACCAATACCTCCTAACAGTGCCCTCCTG
GTGTTTCGAGAGACTACCACTGGTTGCCGAGTTTCTTATGACAACCTGTCATGGCCGTCCAATCGGGGCTAATTACGGAG
GAGTACCCTCCCAGGAAAGTATCTTAGGAACACTATTGGAGAAGTGATCTTTGCTGGGTCAGGCAAAAATCACATTAGTC
TCGGTACGAGTAGGAACTGGGAGTAAAAATATCTTTAGTCCCGATTTTAAAGCCCATGGGTACTTTTTGATCTTTAGTCC
CGGGTCAATAGTTGTCAGGCCCCCAACGAGCTTTAGTACCGGTTGGTAACACCAACCGGGACTAAAGATAGATCTTTAAT
CCCGATTGATGATACCAACCAGGAATAAATATCTCTCTCCCGCGTTATCCCATCTCTCATGCTCTCTCTCTTCCAGATAT
CCTCTTCGCGCGCAGCCTCCTCTTATCTTATTTCTACTCCTCCTCCTCCTCCACTCATCCTCCCCTCCACTCTCCTTCGT
TGATCCCTCTTCCAATCCATGTTTACGTCAGCGCAGGCAGCGGCAGACGGCCGGGGGCGTCGGCGGGCGGGAGGCGGGGG
GCGGCGGACGCGCTGGGAGGGGAGGAGGCGGGCAACGGGTGTGCCGGGAAGGGAGGCGGCGGGCGGCGGGCGTGCTGGAG
GGAGGCGCGGGCGGCGGGCGTGTACAGAGGGTAGGCGGCGGGCACGCCGGAAGGAAGCGGCAGGCGCGCTGCGCACACAT
ATGGGAGGCGGCCGGTGGCGGCACAGACGGAGGGTAGGTGGCAGGCGGCGGGCAAGACGGAGATTTTGGGGATTTTGGGG
ATGATTTGGGGCATGATTTTGTGATGTAAATTTGTGGATGATTTTTAGATGTTTTTGTGAAGTTGTGGATGAATCTGTGA
TGTCAATTTTTGGATGATTTTGTGTGGTTGATTTTGTTGTTGAGTTTGGCGTGAAATCAATAAGCAAGTAGCAAAAAAGG
TAAAAAAAGAAAAGAAAAAGTTTCAGCCACGCGGCGCTTTTATTTTTAGTCCCGGTTAGTAACCTCAACTGGGACTAAAT
ATGGATCTTTAGTCCCCGTTATTTCAACCAGGACTAAAGAAGGGCATCATTAGTCCCGGATTCGGGGTCCCAGTTTGCAA
CCCGGGATTATAGGGGGTTGCAAACCAGGACTAAAGACCACTTCTTCAGTAGTGGAATACCCGTACTGAGCTGCCACCAT
CAGCGGCCAACATCTACTGTCCCGCAACATATATGGCCAATTAATGATATCTAATAATCTAAGCACCCTGCTTACATTAT
CAAATACTACTCTATACCCTCGAGAATAATATAGAGCAATCATTCGTATGAACATTAAACCCACACCACTGCACCTCTCT
GGTAGGCTAGTCACACAAATATATCAGCACAAATATAAATGAAAGCCAGTACTGAGACAAAGTAAAGTACTGAAAGTATA
TAAAGAAGAATATGCTATTAATTCCGAAAGTCTTACAAACGAAGAAAGAAAAGCTACTAGAGCCATACCCGAAACCTTCC
GAAGACTCGAGGACTCCAAGAACTATTCTATTCCACTCCACTTAGCACTAGAGCACTAAACTAAACTTGAGAGAAAGATC
AAAGCTTCTCGCTTGAGTTTGCATTGAAGTGGAGAATGAGCACCCTTTATATAGCCTCCAATGATGGTTATGGCAGTTGG
AATTGTTGGAAAATTCCCTGCAACCGTCATTGGGAGTGCATCACAAGCGTACACGTGGAGGCCCGAGCTGAGGCATCGCT
GCCAGGGTTCGGCCGATCCTGGGCTGGCCCAGCAGGCCTCCACATTTGGTCAGGGGGCTGACAGGTGGGTCCTCATGGCA
GTTGTGGCAGTTATGGCGTTTTTCAGGACGGTTACACTTGACATGTGGGCCCCTCTATTCTTAAGCTTGGTTAGGAGTGA
GTTTTCTTCATTTCTTCTCCATTTATGTGCTAATCTCTACAAACAAATAATACTCCAAGTACATGTGGAAATATATTATT
CTAAAACATATATGCATTGTAAGGATGATATTGTTATAGTTCTAAAATACCAACTTACTGCATTCAAGGCTATATAGAAT
TGTTTTTTTTTACTGGAAGGACTGCAGGGCTTTGCCTGGCACTGTATTTTCATTAAAGAAGGGAAATATTTACATGGCTA
TATAGCATTGTTGATAGCTGAAAAGTTAAGTTGCTGAAAATCAGGTGTCTATACTTTAGAAAAGTAAGAAAACAAAAGGT
AATGGAGCTTGGGGGCACACGACCTAATACAGTAAATTTA