Basic information from miRBase |
hairpin accession number: MI0010553 |
Located between position 15998532 and 15998589 on chromosome 05 strand - |
mature miRNAs for MI0010553: |
osa-miR2093-5p (MIMAT0010050): GTGCATTAATTGGAAGAACA |
osa-miR2093-3p (MIMAT0010051): ACATCTTCCAATTAATGCAT |
References |
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds" |
>promoter (3kb upstream pre-miRNA, by PMRD):
AAACCCCACATGCAACGGTGGAAGTGGTGGTTCGGCCGAACCAGGGGGTTCGGCCGAACCTGGGCTAGGCCCTCCTGGCC
TGGCCTTCGGTTGGTGGACTCCCTGGACCTTCCTCTATCCATTTCTCGGAGTTTTGGATTGATTTACCGATGTTTCAACG
AAGTTCTCAACCCCTCCTTGTATGGATACATAATTCTCCTCACTTTAGTCTGATTTTCCTCCCAACTTCAGGGTTTATCA
TCTGCATACAAATATACACCAACACTGATGGAATATGTGAGATTAAGCACCTATTTCTATGTTGGATGTTTTATTATATC
GACTTTATGCAGATGCTGGCGGTATAGAATCGGCATTTAACAGCCGCCAACAGAGGTAGAATCAAATAACAACTCAAAGC
TGTAGCAAACCACCGCTACGTTTACTTGCCTTCACCGATGGCGAGATGAACTCTAGTTGCATTCCAAAGTGGCATCACCT
GAATAAACACCGACTCAGCCTCAAACTACACACATATAATCATTCAAGAATCACACATTCACTTTCTACGCTGGGAACCC
ACCCCAAACAACATAAAGAAAATTACCGATAATCTTCCTATAAAAGCAACATATATTAACAACTCGATACCTCCAATTCT
ACATCACATAAAATAGCAAAATATATCATTTCTGACATCTACAGAACAAGAGTTACAACTTTTATTTAGATAACAAAACT
GAATTCTTCCATTTAGCGGGCCTAAAACATGGCACAAAACAGAGAAGTGCATCTGCCCAGAAAACTGTGCAGCAACCATT
CAAAAGAGCACTGACAACAAACTACAAGATAAAAGCTAACAATTTTTATGTATGAGGTAGATCACAACATATGCTACAAC
TTCTGTAAATACAAGATTCTCGGATTCCATCATTAAGATCCTCTAAAATCCCTCTGAACCTCGACTACAGATAAATGCAT
CGACATTCAGACAGCCAACTTCAGAAATTGATACCTCCTAAACCACTTGATATAAAATCATTCCATTTGGTCAGAAGATA
GATATACACGTTATCTACAACTTTTGTATAGAGACTTTTTGCAGGAAATCCCATTATGTTGGCCGAAAAGGCATCCAAAA
CAGAACTGCGCAGGGGGCATATCAGCAAAAACCTGGCTGAGGAATAAATCGGTGGATCCCAAACTTACTCGCTTCCAACA
CTTGATCTAAACCCTAATAGAAAACCAAAACAGGGGAAAAAGATCATGTATTGGTACCTAGGCCTCCATGGGCAGCGGTA
ATCAAACCCCTCATTTCCATCTTCACATTGATTCCCTCCGCTTCCTTCTTTCCCTTTGTTCTCCTTCCCTTCTTCTTCTT
CCAAGGTCTGCAATAGGGAAGGCATGGGGAAGGTCGACCAGAGGGGGAGGTGGGCGCCCCCAGGGTACCAAATGATGGCT
AGGGGGAGGTGGGGGGGGGACCTCCTAGGGTTTTGGGGATGTGGAGGGGGCAGCTGGGCCTTGGGCTGGCCGAAAGCTCG
CCCAGCTAGCATATAACTATTGTTTTTCTTCTAATTTCAAACACCAAAACCTTAGGGACTTCCAATATATCCTCTACGAT
ATTCTATTTTTTCTAGGGCATTACAAATGGACAGCTATACACACTAGGCAAGCGATGGTTGAACCAATGGAGTAGTTGGA
TTGTGCCGAGGCCTCATGCATGGTTGACACGGTTCCTAAGTTAGTGGAACTGTTGTTCCTCTGAGGCGGTGATATCAGTT
ATGAAGTGGTCAACCCAAGTCAAAGCCTCCTGTGGCGACATCCTGAAGCTTTGTCAATCCAAAGTTGTCGAAATATCCCT
CATCGGAAAATCCGTCTCTTGAAGCCATCTCTCAACGAATCCTCTGAATACCGGTGCTCCCCTACCTAGCATGCCATTGT
TGATGGGTTATACCCTAATCCCAAGATCCGTGCCTATATGGTATGTTTTGAGGGTGTAGGGATCAGCTGATATGAGGATG
CAAAAAAACTTATAAATAGAGCAAAGGGGACATAGATTTTTATACAGATTTGGTCACCCTTGTGACGAGTAGTAATATCC
GTAATCCTGTTGGCCGCAGGCCAATGTTGCCATGATATATCAATCTCTCATGACTACAACGCGTGAGGAAAACCTAATAT
AGTCTGGCAGTCTATCGGCATAGCGCACGGGTATAGTGGTCAATGGCTAGCTGTTGTCGACTTCCTTGGAAATCGACTCA
ATGGGATTGGAAGTGGCTCGTATTGTTTTGTATATCTCTTGGCTTGTTGGCTTCTCTTAGGCTTCTCCCCTTCCCTCCTA
AGGGTTTTGTTTTTATACCCTCGGATGGCCCCATGTTCAAGTAGAATTAGGAAGGCAAGTATGGATACAATCTGAGTAGT
CCTGCCAAGCCTAAATAGGACTATGTTTTTCTTTCCTTATTTGGTACTCCTTCCTTGTCTAGTTAGGACTTTGTCTATAT
GCATGAGGCTTAGGATTTGGTCTATGCTGCCTAGTCGATTGTCTACATGCATGAGGCTTAGGATTTGGTCTATGCTTCCT
AGCCGAGCTAAGCACACATGCATATGATATCCCATATTTAGGAAACTGACATATTCCTCCTTATTCATCATCTTCCTCAT
CGGACTAATCCCCTGCTTATATACTCAATGAGCACATTAGTCTCTTATTTTTTTTATCATCAATTAGCCAAAACCCACTA
AGCGTCTAGGTGCTCTTTGAATTATGTCTCCAAGATTCACAATAGCCTAGCTCTCACGTAGCCTAGCTCCTATATGTAGT
GGTCAATGTATGCATAACACTCCGTTTGTACTTTTATCCTTGTTCGTGTAAAATGTTCAACACAGGGTTCCATGTTTGGA
GTGTCGAAGGTTTATAAGCTAACCACTATCAACCTAAACTAAAGCATCAACAACAATCATATCTGGGTCACATAGGTCTC
AACTACATAGGGCCGCCCCTTGGGAGGCGCGACCAGAGCG