miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0010561
Located between position 17958127 and 17958233 on chromosome 12 strand +
mature miRNAs for MI0010561:
         osa-miR2101-5p (MIMAT0010066): ACATGTTTACAAGTTAAAATGT
         osa-miR2101-3p (MIMAT0010067): ATTTAACTCAAGTGAGCATTGT

References
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds"




>promoter (3kb upstream pre-miRNA, by PMRD):
AGATCACTCAAAATGTTTGAATATGAATTGTGCTTGACGGAATAAATTGTTGTCTACGGTCATTATTGCTTTCCTTCCGA
GAGTCCCCTTTCCCCGTAGTTTCCCTTCATAGTGTGATTCAGGCACCCCGATTGGGCGAAGGTCTTAAATAAATTCTACA
CATAATTCAATGACCTCCTCTGTTCCAAACCTCTTGGCGATGCTTGCCTCCGGACGAGCACGGATATGAACATACTTCTT
TAGAACGCCCATGTACCTCTCGAAAGGAAACATGTTGTGTAGGTACACAGGCCTGAAAATACCGATCTCTTTGACAAGGT
GACAAAGCAGATGCGTCATTATATTGAAAAATGAAGGTGGAAATATCAACTCAAAGCTGACAAGACATTACACCACATCA
TTTTGAAGGGCTTCTAATCTATCCGGATCGATGATCTTCTGCGAAATTGCGTTCATGAAATCACATAGCTTTGTTATTGT
TGCCCGGACATTGTCAGGAAGGATACCCCGAATTATAACAGGTAGCAGCTATGTCATCAACGCGTGACAGTCATGATGCT
CTCGAGGAGTATACAGGCGGTACCTTGATGCTCTCTAAGCATTCAAACATACTTTCCTTCTCTGCCTTGCTAAGAGTGTA
GTTGGCTGGACTCAAGTAATGGCTTCCTTTCTCCTTTGGTTCCGGGTGAAGGTCGCCGCGTTGTTCCATATGCTTCAGAT
TATGTGCTTCCAGTGTATCTTTTGACTTCCCATATACACCTAGGAAGCCCAGTAGGTTTACGCAAAGGTTCTTAGTGAGG
TGCATCACGTCGATTGCATGGCGGACATCCAAGATTTCCCAATAGGGTAAATCCTAAAAAATAGAGTTTTTCTTCCACAT
CGACGTGTAACCATCTCTCCCCTCAGCCAGCCTGCCAGCCCACATCGGCGCGTAACTCCGAAAAAATAGAGTTTTCCCGC
CCGCCCGCCAGCCAGCGCCGACGCCGTTGGACCCGCTGCCAAGAGGTTCCCCTCTCCTCTCCCCTCCCCTACAAGCTTTG
AAATGTCTCAAATTATGAGCAAATATTTGATTGCCCCAAGATTCTGATCATTGTGATGTCTGTGTTGTGAAATGATGGAT
TCTTATAAATTAGCATTTGGTCATTTAGGATGAAATGTTGATGCAATTTAAGAATAATTTTGCAAATCTAACTCTAGTCT
ATAATATCACAGAAAAACAAAATAACTCATGAAAACTAGAATGGAAGCATATCTGCGTAAGTATTTCGCCTACAAAATAT
GCAGAATTAGTACTCCGGTGGTTAGTTTGCACCACCTGATCACTAGAAAAGATCCTAAAATAGCCACATTATATGTAATA
TGCTACAAATATCTTCTTTCTTAGCACAATTGGCATGCAAATCAAACATTGGTAGACAACTAGCAAGGTCAAAATTTGGA
GGGATTCCCTACATAATGGTTGGCTGGTTGCTTTAATAAACAAAATCAGGTTCAGTCAAATGTTTGGCATGCCACTGAAA
ACAATCCTCATGTGCTCTAATAAACCTGAAATTTACTCGAAATATACTAACCAAAGCCCCACTGTTTCTTCCATCTAACA
TCATGTTTGGAGGTGAGTTTCGGCGAAACCAAAATTATATTTAAATTCTGTTGCAGCTTAAACAAAATAGCACCCAAGAA
ACCTCACCGGTGCTGAAGCCAATGAACATTTTCTCGAGACCCAAAGACATGTCCTTGTAGTTCTTGTAAGTTTTGAGGTC
CACCGTCCTCAGATATGGTGCACCATCCATGCTAACCGTCATGTTCATCTGCGTCGACTCCGGTCACCAACACAAGGTGA
TCGATCTTGCCTTATGCTGTAATTATGTATTATAACATATGCTTGCCTGGCTGATCGATCTTTGAGGTCCAGATTAATTG
GGGAGCCGCTCTTTGATCATTTGATATGTGTGTGTTTTGAAATGGGGAAATTTTGGTAAAATTTTGTTCTGAAATGTATG
CTGAACTTGATCTTTTCAGGAAAGATTAATTGTAAATTATGAGTTGTTGTGTTGATGGATAGGAGTAGCAGAAGATGAGC
AGTGAATATCCTATTAGTACTAGATGGGTACCCCACGCGTTGATCTCGAAGAAAAGTGGACAAAAATCATCTTCAAGTTA
GTGAGATGTCCCGTGTTGTAGCCAATTGTAATATAGAACTTCCGTCTTCGATTCATTGCATTTCATATCAGTTTCTGCTT
TTGTTTTGTTTGGCCGGATAGTTCGATTGTGGCATCCACCCGGCTTACTCCGGCATGGCGGTGCTCCCCTACTTCGATGA
GATCGATCCCTCCACCATTGATGTCCTCATAACTCCTAATCACCCCCCCCCCCCCCACATTCCCTTTTCACCCTTCTTCT
TTTATTTACCCCTTCTGTGATTAACTTTGCCCTTCAAATGTGCAGCTTTTACTTGGACCATGCTGCCTCTCTGCCCTACT
TGGAAAAGGTAATGTTTTCACTGTTTTCTTCTTCGACAGTGAGTGCTTGTTCTGACCCACGAACGTTCGCTTATCGCAAA
CAGTCAAGATAGGATTGATCGATATTGTTTCTGATAACGTGCTTTATCTCCTAGTATTTTGCTTTTTCTAGTTACAAAAC
CAAATCGCTGAATGCTTATTTTTCCTATTATTAAGTTGTTTGGATTGGATTCTATTTCCTAAAAAAAATATCCGGAATCT
GATAATGATTAGATTTTTTTATTTGAATTATAAACTAAAATTTCTAACCGCAAATATAACTCATACTATATAGTTTATAA
ATAGAAAATCTATATATATGTAAAGTTTATATAAAGTCTATGCATAGACGGTCCTATAGAAAGTTTATATTAAAAATAAT
ATATATAGAAAGTTTCCAAAAAATTAATTCATCTAGGAATGTTTCCACTAAAAAGGCTATAGAAAAAGACTATAACGAAA
AAAATTAAATTCGGAAAAAAAAGAGTGAGAAAACAAAAAG