Basic information from miRBase |
hairpin accession number: MI0010564 |
Located between position 16846519 and 16846591 on chromosome 12 strand - |
mature miRNAs for MI0010564: |
osa-miR2103 (MIMAT0010071): TTTCCCTCTCCGTGCGCGCTCG |
References |
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CTTATCTTTTTTATATTTACACTAATTTTTCAAATAAAATAAATGGTCAAACATTATAAGTCAAAAACGACAAATAATAT
GGGACGAATGTAGTATAGAAGAAAAAATATACTAGAAGTGAGATAATTAGCGGGCTAAAATAACCCACTTGCATACCTGG
AGGTCGACGGGGAGCACGCGGTGGCGCATCCACTGCTCCGAGTCGCGGCGCCGCAGCCGCATCTCCTCAAGCCGCAGCGT
CATCGACTGCAGGTACGTCTGCATGTTGCCGATGAGGAGCGCCATGAGGATGAGGCCGAACACGGCGAGGAAGATGGCGA
ACAGGGCCTCCCCCTTGTAGTGCGTCGTCTTCAGCCCCTGCCCCACGGTGCTCAGGTTCTGGAGCCCCCACCAGAGGCAG
AAGAGCACCTTGGCGACCAGGTTCGTCGTCGACACCACGCCCGACTGGATCGCCGTCGTGAAGATCCCGTACTGGAACCC
GGTCCCGGCCTCGTCCGCCGGCGCGCACTCCATCACCAGCACCTGCCGGATCATCGTCCTCCACTCCAGGAAACCCGACT
GCCCCAGGTTCCCTCCTCCGCAGTACATGTACTTCTTGCACTGATGGAACTTGAGCACCCTGCAGTTCTCCCTCCAGCAG
TCGTCCAGCCTCTCGATCGATAGCAGGTACCAGAACGCCCCCACCATCTAATCGAAATTGTAGTATCAATTGTTATATCA
CAAGTAAATTGGTTCAATATAGAAAACCATACATATTTTAACACTTACCTACATATATTTTGTTACTGATGTTTACAAAA
TCACACTATCAACGAACATGTGCAATGGCGAGATAACGTGGTTTTTTTTATCTATATATATTTAGGATGTGTGCGCTGGA
CGTGGAACAACCTCGTCATCTCGCACGTCGTTCAATTCGTTGATAGTTTGATTTTGTGAAGCTTTAATCCAAAAACATAT
GTAGTTAATTGCAGGGCTTAATATATATTTTGTTTTGGCTTATTCTATCGGTGGTTACTGATATACCGAAATTTTTATAA
TTTTAAACAAATGTTGGTCAAATTTGAACAAAATATTACCAAATTAAAAAAATTAAAAATTTTGGCCGAAATAATATCGT
ATCGGGGGGTCCGAAATTTCGAAAATTTCATTCCGGAATTTCTAACACTGGTTAAATGCCAAGTATCGAAACGTGTGTTG
TTTTCTGAAACTTGAAGGTACTTACGTTATGTGAAATTTACAAATCGAATGAGAAGATTAGTGGACGTACGTGGCTGGCG
AGCATGTAGAGGAGGAGGTAGTAGGCGGCGCCGGCGAAGGCGGTCTCGGCGAAGACGCCGGTGGTGCGCTTGAGCTCGGA
GGTGATGGGGTAGAAGCGGACGAGGCGGGGGATGTACTGGACGAGGACGATGAAGAGGAGGGCGTTCTTGGTGGGCAGGA
GGTCGGCGCCCTTGGGGCGGTGGAGGAAGTTCCAGATGGGGATCTGCGGCAGCGGGAGCACGGAGAGGAGGTCGACGACG
AAGAAGCGGCGGACGTAGCGCCGCGCGATGGCGGCCGGGTCGATCACCAGCTCGCCGCGGCCGAACACCCGCGACGACGG
CGCGATGTACGCCGTCCGGAACTGGAGCGCGATGCGGGCGAGGTAGAAGAGGTCGATGGCCGAGCGCACCGCGGTGGCGC
CCGTGGCGAGGCCGCGGTCGAAGCCGATGCAGGTGTTGCTGTCGGTGGCGGTGACGGCGGGGAGGTAGAAGAAGAGTGGG
TCGACGGCGACGGAGACGATGCAGGCCATGACGAAGAGGCGGTTCATCCGCACCAGGAACGCGTCCTGCGGGTCGAAGAT
CTTCTGGGACATGTTGGTGAGGTCCTCCTGGAACACGCGGCCGATGCTCTTGAGCCGCTCCGCCCGGTAGCCGCCGATGC
TCATCACGCCCGCCGCCGCCATGCGCACCGACCGCGTCCGGATCTTGGGCGCGCTCGAGAAGTAGCTGTCCATCACGTGC
TGCACCCTGCCGCCGCCGCCGCTGCCGTCCATGGTGTACGTCGCCGCCGGCTGCCGCTCCTGATCCTCCTGCTGCTCGAG
CCGCACGAACGTCCCCTTCCTCCCGTTGATCGTCTGCGTCCTGTACCCGCCGCCGCAGCTGCCAAACATCTTACGACGCC
TCCTCACCTGCTGCCTCCTTTGCCGCCGCCATTGCTGATGACATCGATCGATGCAATTGCTTCCTCATGCATGCATTGCG
ATTTGCGATTCCTTCTTGAAGAATCGATTGATCTCTGACCAACGAAATTTCAGAGGGATCGATTTGTCAGAAGCATTCTT
CTCGATCAGAAACACTCTCGATCGATCGATCGATCTCTCTCGTGGCTGTGCTGTGTTAGTGGTTGCATGTTGTGATGCCG
TGAGGAGAGGCGAGCCTCACACCTGGAGTATGGAATGGCCCCACAATCCACTAAGCAATAATCTGGGACGCAGTCATGGA
AGTTGAGTAAATACTACCTCCATTTTTTATGTACTCCTATGTCATCCCGTTAACTTTTTTACAAACGTTTGATCATTCAT
CTTATTCAAAATTTTTGTACGAACATAAAAAGATTTAGGTCTAAGTATTATGCTTTTTAATTAAATTTTATAGGGTTAAG
TCCATTTAACACCCTCAAACTTTTCCGTTAGTCTAAATCACACCTTTAACTCTAAAACCATTTGACCCCCTCAAACTTTT
AATACCGTGCAAAAGACCCCCCCCCCCCCCCCGGTTTTCTACCCCGTTTTTTTCATACAAGAATGCCACGTCAGATACCA
TATGTATAAATTAGTGGGGCCCATATGTCAGTCTGGCCTTCTTCTTCCTCCTTCCCCTTTCTCCCCCACTCTCTCTCCCC
TATCGGTGGTAGCACACCCAGCGGCAAGCCGCGCCACCAGCCCACCACCTCCTCTATGAGCTCGCGCCAAGGGAGGAGAT
GAGGCTGCCTCCAACTCCAGCCGCGGCACGGGGAAAGTGC