miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0010564
Located between position 16846519 and 16846591 on chromosome 12 strand -
mature miRNAs for MI0010564:
         osa-miR2103 (MIMAT0010071): TTTCCCTCTCCGTGCGCGCTCG

References
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds"




>promoter (3kb upstream pre-miRNA, by PMRD):
CTTATCTTTTTTATATTTACACTAATTTTTCAAATAAAATAAATGGTCAAACATTATAAGTCAAAAACGACAAATAATAT
GGGACGAATGTAGTATAGAAGAAAAAATATACTAGAAGTGAGATAATTAGCGGGCTAAAATAACCCACTTGCATACCTGG
AGGTCGACGGGGAGCACGCGGTGGCGCATCCACTGCTCCGAGTCGCGGCGCCGCAGCCGCATCTCCTCAAGCCGCAGCGT
CATCGACTGCAGGTACGTCTGCATGTTGCCGATGAGGAGCGCCATGAGGATGAGGCCGAACACGGCGAGGAAGATGGCGA
ACAGGGCCTCCCCCTTGTAGTGCGTCGTCTTCAGCCCCTGCCCCACGGTGCTCAGGTTCTGGAGCCCCCACCAGAGGCAG
AAGAGCACCTTGGCGACCAGGTTCGTCGTCGACACCACGCCCGACTGGATCGCCGTCGTGAAGATCCCGTACTGGAACCC
GGTCCCGGCCTCGTCCGCCGGCGCGCACTCCATCACCAGCACCTGCCGGATCATCGTCCTCCACTCCAGGAAACCCGACT
GCCCCAGGTTCCCTCCTCCGCAGTACATGTACTTCTTGCACTGATGGAACTTGAGCACCCTGCAGTTCTCCCTCCAGCAG
TCGTCCAGCCTCTCGATCGATAGCAGGTACCAGAACGCCCCCACCATCTAATCGAAATTGTAGTATCAATTGTTATATCA
CAAGTAAATTGGTTCAATATAGAAAACCATACATATTTTAACACTTACCTACATATATTTTGTTACTGATGTTTACAAAA
TCACACTATCAACGAACATGTGCAATGGCGAGATAACGTGGTTTTTTTTATCTATATATATTTAGGATGTGTGCGCTGGA
CGTGGAACAACCTCGTCATCTCGCACGTCGTTCAATTCGTTGATAGTTTGATTTTGTGAAGCTTTAATCCAAAAACATAT
GTAGTTAATTGCAGGGCTTAATATATATTTTGTTTTGGCTTATTCTATCGGTGGTTACTGATATACCGAAATTTTTATAA
TTTTAAACAAATGTTGGTCAAATTTGAACAAAATATTACCAAATTAAAAAAATTAAAAATTTTGGCCGAAATAATATCGT
ATCGGGGGGTCCGAAATTTCGAAAATTTCATTCCGGAATTTCTAACACTGGTTAAATGCCAAGTATCGAAACGTGTGTTG
TTTTCTGAAACTTGAAGGTACTTACGTTATGTGAAATTTACAAATCGAATGAGAAGATTAGTGGACGTACGTGGCTGGCG
AGCATGTAGAGGAGGAGGTAGTAGGCGGCGCCGGCGAAGGCGGTCTCGGCGAAGACGCCGGTGGTGCGCTTGAGCTCGGA
GGTGATGGGGTAGAAGCGGACGAGGCGGGGGATGTACTGGACGAGGACGATGAAGAGGAGGGCGTTCTTGGTGGGCAGGA
GGTCGGCGCCCTTGGGGCGGTGGAGGAAGTTCCAGATGGGGATCTGCGGCAGCGGGAGCACGGAGAGGAGGTCGACGACG
AAGAAGCGGCGGACGTAGCGCCGCGCGATGGCGGCCGGGTCGATCACCAGCTCGCCGCGGCCGAACACCCGCGACGACGG
CGCGATGTACGCCGTCCGGAACTGGAGCGCGATGCGGGCGAGGTAGAAGAGGTCGATGGCCGAGCGCACCGCGGTGGCGC
CCGTGGCGAGGCCGCGGTCGAAGCCGATGCAGGTGTTGCTGTCGGTGGCGGTGACGGCGGGGAGGTAGAAGAAGAGTGGG
TCGACGGCGACGGAGACGATGCAGGCCATGACGAAGAGGCGGTTCATCCGCACCAGGAACGCGTCCTGCGGGTCGAAGAT
CTTCTGGGACATGTTGGTGAGGTCCTCCTGGAACACGCGGCCGATGCTCTTGAGCCGCTCCGCCCGGTAGCCGCCGATGC
TCATCACGCCCGCCGCCGCCATGCGCACCGACCGCGTCCGGATCTTGGGCGCGCTCGAGAAGTAGCTGTCCATCACGTGC
TGCACCCTGCCGCCGCCGCCGCTGCCGTCCATGGTGTACGTCGCCGCCGGCTGCCGCTCCTGATCCTCCTGCTGCTCGAG
CCGCACGAACGTCCCCTTCCTCCCGTTGATCGTCTGCGTCCTGTACCCGCCGCCGCAGCTGCCAAACATCTTACGACGCC
TCCTCACCTGCTGCCTCCTTTGCCGCCGCCATTGCTGATGACATCGATCGATGCAATTGCTTCCTCATGCATGCATTGCG
ATTTGCGATTCCTTCTTGAAGAATCGATTGATCTCTGACCAACGAAATTTCAGAGGGATCGATTTGTCAGAAGCATTCTT
CTCGATCAGAAACACTCTCGATCGATCGATCGATCTCTCTCGTGGCTGTGCTGTGTTAGTGGTTGCATGTTGTGATGCCG
TGAGGAGAGGCGAGCCTCACACCTGGAGTATGGAATGGCCCCACAATCCACTAAGCAATAATCTGGGACGCAGTCATGGA
AGTTGAGTAAATACTACCTCCATTTTTTATGTACTCCTATGTCATCCCGTTAACTTTTTTACAAACGTTTGATCATTCAT
CTTATTCAAAATTTTTGTACGAACATAAAAAGATTTAGGTCTAAGTATTATGCTTTTTAATTAAATTTTATAGGGTTAAG
TCCATTTAACACCCTCAAACTTTTCCGTTAGTCTAAATCACACCTTTAACTCTAAAACCATTTGACCCCCTCAAACTTTT
AATACCGTGCAAAAGACCCCCCCCCCCCCCCCGGTTTTCTACCCCGTTTTTTTCATACAAGAATGCCACGTCAGATACCA
TATGTATAAATTAGTGGGGCCCATATGTCAGTCTGGCCTTCTTCTTCCTCCTTCCCCTTTCTCCCCCACTCTCTCTCCCC
TATCGGTGGTAGCACACCCAGCGGCAAGCCGCGCCACCAGCCCACCACCTCCTCTATGAGCTCGCGCCAAGGGAGGAGAT
GAGGCTGCCTCCAACTCCAGCCGCGGCACGGGGAAAGTGC