Basic information from miRBase |
hairpin accession number: MI0010566 |
Located between position 4601427 and 4601509 on chromosome 12 strand + |
mature miRNAs for MI0010566: |
osa-miR2105 (MIMAT0010073): TTGTGATGTGAATGATTCAT |
References |
[1]Xue LJ, Zhang JJ, Xue HW, Nucleic Acids Res. 37:916-930(2009)., "Characterization and expression profiles of miRNAs in rice seeds" |
>promoter (3kb upstream pre-miRNA, by PMRD):
AGTTGGTTGCTTAAATAGGCAGATAAGTGAGGCATACGGCTAGTACCGAGTAGGACTTTAAAATTTCTAAATCAAGCGCC
GGCTGTTTTTGGATTCGCCACCCTGCAAAGATCCTAAAAATTTAAAGAAAATTTTCGAGTGAACAGTAACCTGTGAACAG
TAATTCTGTACTCATAATAGTGAATTCAGCACTAAGAATAGTAGTGAATAGTAGTGAATACAGCACACATATATATTTCT
GAATAATATGTATATGTATATATGTATATATATATGTATATATATATATGTATATGTATATATGTATATATATGTATATA
TATACATATATGTATGCATATATGTATATATATATGTATATATATATGTATGTATATATATATATATATGTATGTATATA
TATATATATATGTGTGTGTGTATATATATATATATACATACATATATATATACATATATATATATATGTATGTATATATA
TATATATATATGCGCACGTATATATATATATATACATACATACACACACACACACACACACACACACACATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACATATATATATA
TATATATATACACACACACACACACACACACATAGATATATATATATATATATATATATATATATATATATATATATATA
TATACCGTATACCCTACCACGTATATATATACAGTAGAGATGATATATAGATATATATATATATATAGTTTTCAAGATGT
TTTAAATAAAAAGAGTGGCATATTATTATACTTTGTTTTATGATAAATTTAGTAATATAAATTTTACATGATTGAATTTT
TTTATTAATATTTAAAGTTAAAAATATTTTAGTTGACACTATATATGCTAAAAAATACTTATATTTTTGGAAACGGGGAG
AAGTAGCTAGCATGCATTGACGACGACGCCGTACACGTACACATCCTGTTTAGGAATAGTCGAAGATCGAGAGAAGAATA
TAAAATTAATCAAAGCCGTAGTCCGTATGCAAATTAAGTACGTATACGTAGAGTACTTCCGTTGATGACATGACTGACAC
ACACCTCGATCGAGACTGAGAGCGAGCATGCATTGGAATTTGACAGAATTTTGAGTCGAGATTTCACATCAGGAAAAACC
AGATCGGTCCAATATATGCCGGTGAAATTAATTTGGATGAGTGGCACGCCGATGTACCTAATAATTGACACATTGCTCGC
ATGCATTTAAATTTTAATTAATTACACATCTAGATGAGTATAAGTACGGTGATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATACCTACCTCTACCTTTGGAAGGAAATTGAAATTGAAG
CTCCTAATTAAGCTGCAATGCTGAATGCATGCTTCAATGCAGAACACCTGGCTAGGTGCATATACGCACATGTACGTATG
TAATGATTTATATGTTTTAAGAAAACATGTAAAAGATGAAAAAATATTTTGTATATAAGTTTGTACACAAATATTAAGTA
TAAATTCAGTATACACTTGAAGATAAAAAATAACAAATGTAGCTTTTTGTTTTTCTGTCAAAATTTGTTATTTTTTTTCC
GGGTGTATATCAAACTTAGCCTTGCATATTTAATAGATCTAACCAACTTAAATATACATACTTTACATATCATAAGAATT
ATTTAAATTGCACGTAAGAAATGGATTCAATTATACGTGTAGAAAATCCATGTCATGTCTGATACGAATACGAAGGCAGT
TAAATTGATAAACATGTCATGCATGTATGTATGGTGCAGACTGCATTTTGAGAATTGTAGGCAGGAGATTGGACGGATAA
ATATACACAATTCCATTCCGCGGGACCGGCAGTCGCGCAGGACGGCCGTGCGGCACCGCCTCGCTCCCGCAGCCCGAGAG
AGCGGCAACGTGGTGGAGGGCGGTCCCGCGTGCGACTGGCGTAATCCCGCGCGACGGCGCTGCGCGACCGCTGCGGTCCC
GCACCACGGCGCTACGCCACCTGCACGGACCTGCGCCACGGCTCCGCGTGATCGGCTCGGTCCCGAACAACGGTGCCATG
CGACTGCCTCGGGACCGCGCGCGACCACCCTCCACCACGCTGCTGCTCTCCCAAGCTGCGGGAGCGAGGTGGTGCCGCAC
GGCCGTGCTGCGCGACCGCCGGTCCCGAGGAATGGAAGAGCGTCACCGTCTCAGTCCCACGTCTCCGTTGTGTGGAGGAG
GTATATTTGTGCAAATGTTTTACATGCATGTATATAAACACAAAATATTGAAAAAAAGGTATATTTTCAAATTTAATTCC
AAAGATGAGAGAGTAGAAAGCTTATTTGGAGGCCCAATTTTGGATTGGGCCAAAGTTGGATTGCATGGAGTTCCATAAAT
ATACATATTTTACATATCATAGTACCATATATTTATTTTATCGCATAAGTACCATTATAACTAAAACCCAAACATACCTC
CAAGCACTGGTGGATAAACCATCTTTGGTCGGTCGACCCTAGATTTTTAGTCTCGGTTGTTTATACCAACCAGGACCAAA
AATAAAACCACCCCGATCCATGCGTGCGCCAGACTCTCGATCTTATCGATCCCTCCCCTTCCTCTCTCTCTCATTAAACA
GCAAGTTCAGCCTCCTCCAGTCCTCAGATCGGATCTGGCTAGCTAGTCTTCTCCTCTCCCCTTCCTCCCCTTCCCCTCTC
CTCCCCCTCCCTACCTCATCCTCCCCCTCCTCCCATACCAGAGTGAGTCCAGGCGGCCGAGCCCGGGCGGCGGCGGCGGC
TGGCAGCTGGCCACGGGCGGCGGCTAGCGGCGGGCGGCAGGGAGCACAGCGGTGGTGGGAGCTGGCGGTGGGCGGCGGGC
GGCAAAGCAGAACTTTCTTTTTTTTTTCTGAATTTGTGAT