miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0003204
Located between position 26459062 and 26459142 on chromosome 11 strand +
mature miRNAs for MI0003204:
         osa-miR531 (MIMAT0002887): CTCGCCGGGGCTGCGTGCCGCCAT

References
[1]Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X, Plant Physiol. 139:296-305(2005)., "Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice"




>promoter (3kb upstream pre-miRNA, by PMRD):
ATGCCTCAGCATGCAGAACATATAGCGCAGTGATCCAATTTTTCAAGAAAAGTGGATTTGTGGATATTTTCTCTCCAACC
GTTAGTGGGTTGAGACCCGAAACCTTCATGTGAGGTGGGGACAGGTACACACACACATATATATATAGTAAATTTGTTTG
GTGCTCCATGGTGCCCGGGCACCATTGTTGAAATTGAGTATATACCCAATTCAAATGAGTATGAAACTTTTTCAATTACC
TAGGTATTAACATTAACTACTTTACTAACTAGTTTAAAGCAAGTTTGAACTGAATTTGAACTTGTTTTTGTTAGATTTTG
ATTCTAGGTATATAGCATCCATACATATAATTAGTTAGGTATGTAATCATGGATTGTGAAATAAAGTTAAATTTGAGTTG
TTTTGTTGATAAGTATAGGTATGAATCAAATTATTATAACTAGGTATATACTCACAATTTGAAAATTTTGAAAAATTTGA
GTGATTTTGTGCATTAGATACCATGGTGCCCGGGCACCATGGTGCCCCATATGAGTGTCCTATATATATATATATACATA
TATATACATATATATATACATATATATATATATATACATATATATACATATATATATACATATATATACATATATATATA
CATATATATACATATATACATATATATATACATATATATACATATATATATATATAGGACGACTCTTTTGTACTCCCAGG
TGTATGTACTCCCTCTTCTTAGTGGATATCCATTAGTTGATAATAAATAATTAAATTAAATGGGAAAATAAATTACCGTT
CACTTTTGTATTTTTCGAATTCTGGATGCATGCAGTTAGGCCGGTACATACGGACATACGTTAGGTTCAAATTTTGATAT
AGTTGAGGTAGCGGGCAAGTATATACTTGTTTTTCCTCGTGTACTGTTTAAAAAGTAGTATATGTCACTGATGAGATTCA
TAAATTAACAGTGTCGTCACTGAGTATATACTGAGAATTCAGAATGAACTGTATCAGCACTTTTTCACCGTCAAAAAATT
AAGCAATGCGTAGCAGTATATATACTAGTTTACGTAGTAGTAGTTGCCGTATATACTGGAGTACCTTTTAAATAGTTGTA
GCAGTACATATATACAACTTTGTTTGGAGGTAGTACAGTATATGTATACTATTTTTTATGTAGGAATGCATACTTTTTAT
TATTTAGTATCAGTATATAACCTTCTTTACTTTAACGTTAGTATACTGATCTATTGAAATGAGTATGTACTGCTCTTTTC
TAAGTATCCAGTACTCGATCGGTTAATTAGGTGTACGTACTGTTTTTATCATGTATCCAGTATATACTAACTCAGTCGGT
TAAGAAGTATGTACTGTCTTTTTTAGTTTCCAGTATATACTAAATCAATCGGTTAATGAGAAATATGTTGTGTCTTTTTT
AGTTTCCAGTATATACTAAATCAATCGGTTAATGAGAAGTATGTACTGTCTTTTTTAGTTAATGAGTATGTACTGTTTTT
TAAAAGTATCCAGCATATACTGAAATCCTCATTGAAGCAGTATATACTATTTTTTAATGGCACCTAGTATGCAGTATTGT
AGTACATCGATCGTCGATAGAAGGTATGTATGGATGCACCTTTTTATTAGATTATTAGCAAAATAATTAATGAAGTACAT
AATACTTCACCGAGTGGTACTTATTAAATAATTAAGAAAATAGTATTTATATCACTTGGTTTCACCGAATGGTTTATATA
ATGAGCCATAAAATGAAGTATACTAGATGAAATTGATAGTATACATATTCCCCCGCAAAAAAAAAGATAGTATATATATT
CAAAACAAAAGCAGTATGTTATGATACTACTTTTATCATTGATGGAAAAAGGAGTATAGTTGTTTGAAAAAAGGAGGAGG
AAAAAGTAGTATCTATCCCAGAAAATAGTGCATCGTCGACTTCATCGCCATCAGCATGGCGTGGCACCGATAGCAGCTGG
CACCGTCGCCTGGAAACGACCAAGGGACGAAGCACGCTGACTAGTGCAACGGATTGGCTACTCGGCTGCGCTTGGATGAA
GAAACGCCGCGATCATCTCTGCTTTGATCTGATACGTGGGTGGATCTGTTAGCACGCCGCCATGCCGTGCCGTCGCCAAT
CGATTTAAAAAACGGCCGCAGCAGCCGAGGGAGCGCGAGTGATCTGTAAGCAATAGAAATAGATTAATGGAAGAACTAAA
CAGAAGCTTCGATCTCCATGCATAAACAAGAAGCAAAGAACAGGAAACGGAAGGACATGGCAGAATAGAATGTTACGGTG
CTCATCTTCCTGGCTTGATGAGTTCGATTACTCCGTTGCACGCCCGGCGGAAGGCACCACTATCGCGGCGCGCGGACGGC
GTCGGTACACCGAGGCACAGCCTAGAGTCAGAGCAGTGCAGCCGTCCGGCGAGGGTGACTAGCGATCGACGGGATGAAAG
AGACACCGCGCCGACTGGCAGCTGGGAACGCGGTAGATCGAACTACCGCCGCCGACGAACTTGCTTTTTATTAATGAAAC
AGATCAGTATTGTTGTGCCTTCCGATTAGGCCGGGATAATTCAGAATTAATAGAATTTCTTTTCAAAAAGAAAAGGATCA
AACGGGTTTGATACAAACACCCGGTAGGAGGGTGGGATCGATTGATCGGTGCTTTCCTTCGATGGACGGTGGATCAAAGC
GGGAGTACATACACCTGGGTGTACAGAATCATTTTCATATATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATATATATATACACTAGCAAAAGTGAAGTGCCCGTGCGTT
GCACCGGGTGATTACGGAGTGTGTATATTGACCAAAAGTGTTGTTTGGTCTAGCAAAAGTGCCTGTGTGTTACAATGTGA
AGCGTACAGATTAGAAAAATATGCAATTAATTAAAATACA