miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005210
Located between position 42926954 and 42927205 on chromosome 01 strand -
mature miRNAs for MI0005210:
         osa-miR806a (MIMAT0004026): ATGTGCTAAAAAGTCAACGGTG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
GATGGGCGGCACGGCGCGGACGCGGCCGGCGAGGCGGCCAGCCGTGGCGGCGTCCCGGGGAGATTCTCTAGGGCTCAAGG
GGGCGCGACGATACGAGGGGTTCGGTATGAGGAGACCGATGGCGGCGCATGGCCGAGCGCGGCGCAGGCGTGGCGAGCGG
CCGCGGTGAGAAGAGGAGGAAAGAAGGGGAGCAAGCTGGAGGAGAAAGAGGCAGGGACGACCAACCGGCGGTGACGCGCG
ACTACGCGCGGCGGCGGGAGCAGAGCAGGAGGGAAAGGGTGACGCGGCGACCGGGGGGAGGAAGAAGAAGCCGACGGCGG
TTCTTGGCGCCCGCGGTGGCAAAACAGAAGAGGTGCGAGGAACTCACCGACGAACGGAGGCATGGGCGCGAACGCACGCC
GAGGAGGCGTGGCGCTGAGATGGCGCGGCCGGGGAAGGATTCAACGGCGGCAGCGAGTGCGGCATTGGGTAAGGGATGAG
AGGAGCGCGGCCATGGCGAAAATGGAAGGGAGGAGCGAGGTGCTCACCGGCGGCATGGCATCGAGTAGGCACGACAAAGA
GAGGATAAGAAAGGTGAACGACCGGGGCATGCGGTGGCGTCCTTGGTCACGGCGGTGGCGTTCTTGGCCGCCGCGACTAA
GGAGGCGGCGGTGCTCCGGGGTTGGCCGTGCGACGGCGACCGGAGTTGAGGGAGGAAGCGGCATGGCTTCACCGTTTGAG
GCACGGAGCAAGGGGAGGGAAAAAGGGGGTCCCGGAGTGGAATTTATAGGCGGGGAGGGCGGGAGCTTGCGAGCGGCATA
GTCGGTTTAGAGGGGGAGCATGCGAGCTGGCGCTTGGCTGCCAACCACGGGCGACATGAAAACGACGAACGACGGGGATG
CGCTCGGTGGTGGAGGCGGTGGATCGAGCGGTGGAAGTCGAATCACTAGGGCAGGAGCAGCTGCACGGCGTGGTGAAAGT
GGGGACGTGGCTGAGGGCTCTGCCTCCATCCTTTGGACGCATGCGCACAGGAGTAGGGGCGGAAGGATGACGCCGGCGGT
GATAGCGTGGATGGTGCGGCGTGGAGCGGCGACAAGGTGGCAGCACGCGATGCAGGTGTTGGTATTTTTTAACGATATTA
CTAGAAATATAATTTCTAACAATGACGCAGAAATATTCATGGTATATTATGGTTACAGAGTTTATCCGTAAGCTCACGCA
TATACCATTGTAGTATTTCACCCAAGGGTATCGTATTTATTTTATCCCATGAGAATATCATGTAGAGAGAACTTGACTAA
TAATTTATATATTACTTGTGATAATCATATCCTGAGCAGGGGTTAAGATAATCCAAGGGTAGAGTGACACACAAGCAATA
GCTACTCATTCTCATAATATATTATCTAAGCTAAGTGGAAAGAAATGAGAAAGAAAATATATTCCTATACTTCTAGTATA
CATACATTCTAGTTATCTGATATACTAGCTAATACTCTCTATCCGATGCCCTCCTGGTACTTCGAGAAGCCACCCCTAAC
TGTCGAGTTCCTTATGACAGCCCGTCATGACCATACAATCGGGGCTAAATACGGAGGAATATCCTCCCCAGGGAATTAAC
TTAGGATCATATACACGCGCGGAGGAATACCCGTACTGAGCTGTCACCATCAGCGGCCCACCTCTCATCCGCAGCATATA
ACCCCAAATAATGATATCACGTAATCTAGACACCACGTCTAAACTTCCAGATACTACTCTAATATCATCATCATGACATA
GAGTAAATGCATAAGTAAACATTATACCCGCACCAAAGCATCTCCCAGATAAGCTAGCAGCATATTCAGTATAACATGAA
CATAATGTAAAATTGGCATTCATACTCTCGGAAAGTATTCCAATACCATAAATGTATAAAGAAGAATATTTAATAATACT
ACAAAGCTTACAAAAGAAGATAGGAAAGCTACTAAAGCCATACCCGAACTCTTTCGAAGACTTCCGGACTCCTAATTTCT
ACTCTATTCCTATTCCACTAGCTTGATACTACTAAACTAAACTTGAGAGAATATGAGAGAACTTTACTTGAGGTGTGTGA
GTGAAGTGGGAATGGCAACTCCTTTTATAGCCTTCCAATGACGTTGTGAATGTTGGAATGGTCGGAAATACCCTCTAACC
GTCATTGGGGGCTAATCCACACCTTCCAGGCGAAGCCCTGGATCGGATGGCACTGAGGAGGGTTCAGCCGAACCTGGGGC
CTGCCCAATCTAGCCCAATTTCGGCTGGCGGCCTCCTCCGTTGTTCTTCTCCACAGACTTGTGAATTTTGGCCCAGTTTG
TCGTGTCAATTCCGAGTCTTGGTCCATTCATATATAAGTCTGGTTCTCGACATCATCCGATTGATTTATCGTCTGTGTTG
ATGTCGATTCTCCTCCACTTTATGATTATTCTCCGCACAAGGTTAGTGAACCTAATACTAGTGGAATATTATTATTCTAA
CATACTCTCTTCTTTTTTAATAGATGACGCCGTTGACTTTTTCTCACATGTTTGACCATTCATCTTATTCAAAAAATTTA
CGTAATTATAATTTATTTTGTTATGAGGTGTTTTATCACTCATAGTACTTTAAGTGTGATTTATATCTTATATATTTGCA
TAAATTTTTTGAATAAGACGAATAGTCAAACATGTGAGAAAAAGTCAACGGCATCATCTATTAAAATAATGGAGGTAGTA
TATATAAATTGCAAGCATCACTAGTTCTCCTCTATTTTGGTAATATTGACGGTCGAAACTGATCGATAACGACCGTCAAC
AACAGCAGGCAGCCCAGTGCTGACGGCAGCGGCGACCGGGCGGACGGTCGGTCATCGCGCGCGCGCGTGAAAATCGAACG
ACGCGGCCGGATTTTGGGTGGCGTCGGCAGGAAGCGGCGAGAGAGAGAGAGAGAGTGGTCACGCGCGACGCACGTGGGAG
AGGAGATGCAGGCCAGGCCATGGCCGGATTCGGCCCAAGC