miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005212
Located between position 36187171 and 36187440 on chromosome 03 strand -
mature miRNAs for MI0005212:
         osa-miR806c (MIMAT0004028): ATGTGCTAAAAAGTCAACGGTG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
ATACAAAAATAATTACATCGGTGCATTTAATTAAGGAAACCTGAGTATCTCACTATAAAAAACAATATAATAAAAGAAAT
GAATTTAAGTACATGTGCTATGCATTGGAAAACTGTAATTAATTAAAGAGAGGTTGATGCTTTACTCCAGAAATCGATTT
ATTATTGTTGGCAAGGGGTGGTTGAGGAGTAGCGGAGGAACTGAAGTGGCGGGTATATGAGATGTGAGGCATCTCGCCAC
GGATAAGCATGGGCAACAGCCTCCGCTCCGCCTCCAAAGCCGGCGATGTGACCGCCGGATATACAACCCGCGGTCGCTGT
AGTGCGCGACCGCAGATCTTCCGCGCCGCATAGCGAAGCGCAGCCATCGACAACTACTTCGCTGACAGTATATCGGATCG
GAGCGGAGCGTATTTTCTCCTCAGACCAGACCTAATCTCTCGGGAAGGGGCTCCCTTCTCGTCAAAATCGACTCAACATA
TATAGTATATACGAGTACCTAACAATCGAAGATCGGTATTGGAAATAATCGGAAACGGGATCGGTAGGAAGAATCGGAAA
CGGTTTAGGGCACAGTTTTACCTTTTCTTTATATACGAATCCAATCGCTCTACAGGCACCTCCCCACCTCCGCCTTGGCC
TTTGTGTGTTCCCAGCGGAGGCCCTTTTATTTATTTAGTTTTTTTTAGTGGCTAACACCATTCCTGTCCATGGCGGCGGC
CGAAGGTGGACACAGCACCCCCACGGAGAGGAGAGGAAAGGGATTATCTCATCTCAGATGAGAGAGGAGGTTCCTATGGA
GTACTAAAAGAAAAGAGGAGCAGCAGCTCGTGGGCCCAGTAAAGACCAAAATGTTGGCGGAATCAGCAACCCGGGAAAGA
AATACAAGTCCACTATGACTCCCTCGGAATATTGGCTGAATCTCATCTTTTACCACAAAACCAAAACCATCTCGCTCGGT
TGTTTTCGAGAATGGTTTGTTTTTTTTTTTTGACTGACGTGATGCCCAAAAACTTTCCGTAAAAACATCACATCAAATCT
TTGGACACATGTATGAAGCACTAAATATAGATAAAAAAACTAATTGCACAGTAATTAGTCTATGATTAGTCCCGAGACGA
ATCTTTTGAGCCTAATTAGTCTATGATTAGCCATAAGTGCTACAGTAACTCACATGTGCTAATGATGGCTTAATTAGGCT
CAAAAGATTCGTCTCGCGGTTTCCAGGCGAGTTATGAAATTAGTTTTTTCATTCGTGTCCAAAAACCTCTTCCGACATCC
GGTCAAACGTCCGATGTGACACCAAAAAATTTTCATTTCACCAACAAAACAGGCCCATTAATATGGGAACCTACTTCTCC
TCTGCCACCTTCCCCTCTCCGCTTTCTGCTCTTCCTTCTCTCTCCTCTCCACAACGGCCTCTGCTTGGGGATGACACTGT
AGGGGGCGGAGCTTTGTGGCGCGGTGGAGAAGATGGGACAATGGGGGATATCGTGATGGCGCTCTTGGCGAGGCTTAGGG
CCTGTTTGGAGAACTTAAGATTCTGAGAAGCAGCTGGTTGGTAACCATCTTCTGATAATCTAGGGGCCTGTTCACTTTGT
TGCAAAAAAAAACCTTACTAAATTTTGGCATTGCCAAAATTTTGGCATAGTTACTAAAAGTTTGGCAACTTGCCAAAATT
TTGGCATGATTTCTTATATAGTTAGCAAAATTTGGCAGCAAACTAAATGTAGCCACTTTTTTAACAACTTTACCAAAATT
TGGTAAGGTTGAAAATAGCATCAAAGTGAACAGGCCCTAGAAAAGTTGGGTTTCCCAGCTTCTGGCTTGCTTATTTTCTG
GATTCTACAAGTACAGTTTCTCAGAATCTGGACCAAAAGCTGGACTGTTTAGGGGAGCTTCTGATACTGTGAGAAGTTGC
AGCGGCTAGAAACTCCTCCAAACAGGCCCTTAGGCTGTGTTCGCTACTCCTAGGAACATATCTCCAGCACACAGAAAACG
GAGCGGTCCATTAACGTATGATTAATTAAGTATTTCCTTTTTTTTCAAAAATAGATCAATATGATTTTTAACAACTTTCG
TATAGATTTTTTTAAAAAAAACGCATCGTTTAATAGTTTGAAAAGCGTGTACGTGGAACACAAGTGAGATGGGTTGGGAA
ACCCATCCTGCCGAACTAAGCCTAAGGCCGAGGTACTCATCCTTGAAGAACATGCCAAAGGCGCTTCATCGAGGAGAGCG
CCACCCTAAGAGCAAGTATAATAGTGTGCTATAAGTATACTACTTTCTCCATTTCAGGTTATAATACTTTCTAGCATTGC
CCATATTCATATAAATGTTAATGAATCTAGGCACATGCTAAAAGTCTTATAACCTGAAACGGAGGTAGTACAAATTTACG
TGGAGGAGAGAGGTAACAAAAAAAATCAAGAGTATTGGCTCTCATGCAAGAACTAGCTTAACACAAGCTCTAAAACAAAT
ACATGTTGTTTATGATAGAGAGGAAAAAAAATTGTAGCCAATCTGATAGCTAATTTATTATATATGTTGGCTTTAAGATG
AGCTAATAGTAGGAAGTGGGCTCTACTATTATCCTTGCTATAAGGCTGAGTTCGTTTCTCAGGTTCCTAACCCTCCATCT
CATTTTTCGCGCGCACGCTTTTTAAACTGCTAAACATTTTTTTAAAAAAGTTTCTATACGAAGGTTGTTTAAAAAATCAT
ATTGATCTATTTATGAAAAAAAAAAAGGAAATGCTTAATTAATCACGCGCTAATGGACTACTCCGTTTTTCCCGTGTGCA
GGGCATGGGTTCCAACCGTGGGAAACGAACACGGCCTAAGTAGGGTAATGGAGAAGAAATGAGGGTGGAACACCGAGAGT
GCAGGAATTAAATTTAAAAAATATACCTTTATTTTTCATAATTTGTGTTTATATATATGCATGGAGCGGAATTGCGAAAA
TATACCTAACCCACGGTGCGGCGATGCGGGAGCGACGCGT