miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005214
Located between position 29168292 and 29168546 on chromosome 07 strand +
mature miRNAs for MI0005214:
         osa-miR806e (MIMAT0004030): ATGTGCTAAAAAGTCAACGGTG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
CTTCAGCATCAGTTCCATGACATCCTTGGCCTTTGCGAGCTCATTCTCCAGGCAGAGCTCATCAACTAGTACCTTGTATG
TTACCTCCCTTGGGTGATACCTGAAACGCACGCCTTCCATCACTAGCTGGTACGCCCTCAAGCGCCCCCCAGGCTTCTGG
CTGGTGCACAACCCATGAACAATGCAATTGTAGGAGACGGTGCTTGGATACATGCCCCTCTTCCCCATGATGTACACTAT
CCTGGATGCACCATGGTGCTGCCCAGACCGGCAAAGGGAGTCAATCATCTGAGAGTAGGCAAACACGTCGGCAACACCGC
ACCGTTGCTGTGGCATCTCCTCGGCAATTCGGAAGACAATGTGGAAGAACCCCTCGATGCAGAGGCATTGCACGAGGTTG
GCGAACGCGGCATTCTTCAGTTCCTGGTCTTCTCCGTTGCTGCGCTCCATGCTAGACCAGAGATGGTTGTCGACAAGGGC
CATAGCCCCGTCGACGTCGCGGCTGCGGAGCAAGGCCTTGACGAGGTAACTGCGCGCGAGTGAGCTGGGAGCCACCCCGC
GGCGTGGCATTTCGTCGAGCAGCTTCCGGACGGCGCGCGGGTCGGGGATGCGGGCGTAGCCGTCGAGGAGCGCGGCGTAG
GTGGCCGCGTCCGGGGCGGCGCGCATGCGGAGGAGGAGGCGGTGGGCGAGGAGGACGAGGAGGAGCGGGGCCGAGGAGCC
GCAGAGGAGGGCTAGGAGGCGGTTGTAGTTGGGGAGGGAGGGGACGAGCGCGGCGGGCGGCGCGGCCTGGAGGAGGCGGA
GCGTGAGCAGCGGCTTGCGGGCGCGGAGGAGGCGGCGGAGCAGGCCATCGGCGGCGCGCCCGTCGAGGTGGCGGGACGGC
ACGGCGGCGGAGGAGGAGGAGAGGAAGAGGAGGGAGACGCGGTGGTGCGCCTCGGCGGCGCGGCCCGTGGCGCAGAGCTC
GTCCACCAGGCTGCCCAGGTCCGGCCGCTCGCCCTGTGCCGCCGCCGCCGCCATCGCCGAGCCGGGCCGAACCAGTTGAG
CACGCTCGATTCAACGTTTTCATAAGCCGATTTACGAGAGCAGAAGGTTTTCAACCTGCAACCTGACTGAACGAACTGAA
GTGAACCTTGATGAGTTCACCTCTCTGGTTGAACGCCAAACCCCGATCCGATGATTTGATAATTTTAGTTAGAATTTAAA
AAATTACTGTTTCAAATTTAAATTTTCAAAAAGATATTTAAGATTTCACTCGAAATCTTCTTTCGTTCCACGTTCAAATC
TCGAAAATTTCGTGATTTTCGATCGGTTTTCGTGGAACGTTAGACCCTCTCTAGCTGGCGAGTGGCTACGCTTTCCACGA
GGCTCGCGCTCGGCCTGGTAAGATCGACCACGGGAAGCGGCCCTGTTAGACACAGTAGTGGTAGACTAGTGTGGGCCGTG
GACGCGCCCACACAAACCGCTGTACCACGGGAACGGAGAGCCCATTACTCCTCAGCCCATCGCAGACTAGTTTGGTGGCA
AGACGCAGCCTCGGGCGGCCTGGTAACGTCACGTACGTGTGATCGATCATGACTGAGAGACCGGAAGCCCGAGTTGGAGC
GTGCACTTGGCAGTTGGCACAGGCTTCTGCAGTGGGGTAGCACGGATACGGCGGGTCCACCGGGAGCTTCCGCTGCATAT
CTATGCACGCGACCGGGTGACGTCTACTGACAGCGGGCTTGCGTTGCGTGGCGTCCGTCCGCGCGCATAGTACGACCTCT
ACTAGGCCATCGCCGCAAGCAAGCAACGAGGAGCTAGCTACGATCACGGGACGGCCGTCGTCTCTCTCGCTCTCACATCC
CAACTCCCAGCTCGATCGATGGCTTTTGCAAAAGCCGACGCAATGGCGTTCTCGCTACCCATGGCTGCACACTAGACCGA
CAGACTCGACGCAGACGTACGTCCACCAGTCAGGCCTGCATGCCCTTCATGCATGTCAGGTTCGGTTGACGCATGCACTT
CAATTCCACTCACGCACGGCGCCTGCACACCCCCACCGTCGCTTCACCCAATCACGCCCTTTGCTTCCATGTCATATTGT
CATGGCTCCACTTGTGTGAGGCCTCTTAAAAGTTTTGGCGTGTCATATGTACAATGTACGACACATTTTGAAGTATTAAA
CATAAACTAATAACAAAATAAATTATATATTTCACCTGTAAACTGCGAGACGAATTTATTAAGTTTAATTAATCCTTCAT
TACCAAATATTCACTGTAGCACCATTTTATCAAATCAAGTAGTAATTAGGCTTAAAAGATTCGTCTAACAAATTACACGT
AATCTGTATAATTAGAATTTTTTTCTATATTTAATACTCTATATATGTGTTCAAACATTCGATGTAACAGATGAAAAGTT
TTTTTTGTTTAGAAACTAAACAGGCCTGAAACTGAGACCTGCACGACTGCATGTACCTGCCTGCACCCAGCTGGTAGCCC
AGTACACCGATCGCGTTTACAGAATTCAGAGCATGGCGCGATCTCTGATCTGCAGAAGCTGAGCTGGAGTACGTACCATG
CATCCATGGCTGGCCTGGCTGCATGTACGCATGCATGCATGTGACATCGCGTAGGCGTATGAGATCACAACAAGGAGCTG
GACGACAGCTAGTGATCTCTGCAGGTAAAATTGCAACGGCGACTGTAAATTGTGTCAGATCGCGCGCCCGCGAATCCCTC
GCGCTCGATCGGACCCCCGGGAGACACGCATATGGAGATCGGCGAGATCGATTCGATCGTGCCTTTGCGTGTCACCTTGC
TCTTGCTTTTCTTCTGCTCCATGGCTTCATTTCATCTCGTTTAGTTGTTCGGAACGTCGACGTCCTACTCCTAGCATTAA
ACTTTAGTCCATGCCATATCAGATTTTTGACACTAATTTAAAGTATTACATATAGATTAATTATAAAACTAATTATATAA
ATCAGAGCTAATTTACGAGACAAAACTAATGGTATGTTTA