miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005215
Located between position 27962767 and 27963007 on chromosome 08 strand +
mature miRNAs for MI0005215:
         osa-miR806f (MIMAT0004031): ATGTGCTAAAAAGTCAACGGTG

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
TGTATATGCAGATGTGCTCACATGTGATATATAATTAGCTGATCATTTCATCTCCCCAGAAATTCCAAAGTAGCAAAGTT
TAATTTAGTGGATTACGATGTATAGGAAACAGCAACTATCCACAGAGAGGAATTACACAATGGCGACTAAAGGACAAAGC
CGTGTATTGTCAACAGCACGAAGAAAAACAAAATTCTTGTCACGAGGCTGACTGTAAAGTACAGCATATATACTACCTGT
AAATAATCCCTCTCAATTAAATTCAAAAATAACACATGTGCATGAGCAAGATATTAGGTCGACGATTCAGCATCGGGTAT
AAAAGGGCATCCAAAACCTTAAAATAATCAAATTCAAGCTGTTCCAAGAAAATTCAAAATCTCTACACCTGATATCCAAA
AACCTCCCATATGCCTCAAATATTAATTATTGAATCAATTAGACATATATAAATCAAATGTTACGATAGACGACACGAGT
TTGATGTTGACGGCTAGCTACTAGATAAACTTGATAGCAGAAGAAAACACAACATGCCATGTTGCCATCCATATGAACCA
ATCATATATCTCTTGTTTTCTCAATCCTCATTCTGGTTTATTAGTTTTACATAGTAGACAAATAAAGAGTAAATTGTGCC
GGTATATCTGTGATGGTATTTTGAAACTCGTCGACAGATAAAACTAATGATATGGGGGGGGGAATTCTATAGTGTTATTC
TTGTTTTGATTTTCCATGCATGCATCATCCTGATCACTACTCCAATAATGTCAATACTACCAATAATAATGTGTTAATTT
CCTCCATATCTTATATGCTATCTACTTCTCATCAGTACTACCACTACTAGAACAACGATTTTTGCAGGTAGCCAAAACGA
AACAGCAGTTGGACGTGGTGGTGGTGGTCATCATTGCAGGGAGGATTGATGCCGCCGTCGCCATCGAGAAGCCGGCTTTC
CATGGACGCCGCTTCTACCACCACCTCCAGCGCCAACATTGTCACCAAGACCACCACGAGGAAGATGACAACAAACAGCG
CGAGGAGGGTGCGCCCTTGCCACCATGATGAGGAGGAGGCCAAGACGAGTCGTTGCCAGATCCGCCGCCTCCGCCTCCCT
CATCGCCGGATCCACCACCCTCGTCGGAGAACCGTGTGCCACGGCCGGGGGAGCACCGCCGCTGCTCCCTTCCCTTCCAA
CACTACCGAGCCCCGCCGTTGCTGCCGTTCGGGTGAGGAAAGAGGAGCTCAAGAGAGGAAAAGGGAGGGAGTTGGGGACT
TAGAAAAAACTGGTGTTTCAGTTTTCTTTTGCGTCTATTTAAATGCCACAACCAAATTTCACCGGATGGCTTAAGAGGCC
CACCTGCAAAAATAAGGGTATTATTGCAGGCAGCCCTTTTAAGCCATCTGCCTGCAAAAATGGGAATAGGATATTCCCAG
GCGGTCGGCCATTGGACTCCTCTCCACACAACGTACAACTACACAGGTGGGCAATCGTAGTCGAAAATAAGATCTGCCTG
TGAAAATCTATGTGTTTCATTGTAGAAATTCGTTTTTCTAGTAGTATGCCATCCATCATCAGCCGCAAGGAGAGAGATGA
AGCAATGAGCAATGGATGATCTTCTTCCAATGCTAGCTATCTACTGTGGCTATGAACAAGAAGGCGGACATATGGAAACA
AACCTAGCTATAAATAAAACAGAGAGAAAAATTTAGATGCCTACTAAATTTGGGCATAAATTAAATAAAAAATCATTTAC
ACTATTTGAATGGAAAATATGAATAGGCTCACATTTTTCCCAATACTTTTGTAGAGGAAGCTAGCAGGTCCTAGTCCTTG
AACACTGAAATACAATATATATGTAATGACAAATTTAATTAGTTTATCATAAATAAAAGAAAATGTTATTAGGGAATAGG
GATGGAACTCTGCTAATTAAGGGTTGTTCGAGTTCAGGCTGCTCCTTAAGATCACCACGGTGCGGTTTTATGGATTGGTG
AAGCATGGTAAAAGAAGATTCAAAAAGCTTACTTTTCTACATTTTTTTTGAAAATAAAACCTTTCTTTTGTTTTGTTGTT
TCTCAGTTAAGATTTTTGGAAACTAACGATTTTTGTAAGTTTTGTCTATGTATAGTATATCTATTTATGGTAGAAGGTCT
GGGATCTCTATCTATTATATTGAGACAGAGAGAGGGAGAGAACAAACAAGTGCAGTGCATTTGCACCGGACCTGCATGCA
GCTTTAGTGGTTGGCAATTGCCATTCGAAATGAATTAAGAATTGGAATAGGAATATTTTTGTTGGCTACCTTGTGAAATG
TTAGGTAGGCTTGCGTCCACGCTTGATTCGATCACATTCGATCAACCAATGTTTATATATACTTTGATGAACCATTAAAA
ATAAATAAAAATAAACTAGTGGCAGCTGCTAATTAACTAATTAAGCTGTTAGGTTGTTTTAGCTCACAGCAATCTGCTAA
CCTATATATATCCATCGAAATCGAGTTACTGTGAGAGAGGCTGAAATCGAGTTACTAGCCGGACATGATTTGTAGTATCT
GACAATTCTGGCCGTATACGGTCGTTGCCTAGTTTGACGTGTTGACACTGACTTGTTGCGTGCTCACGATTTGATTTGAT
TCAGAATTGAACGGATTAGTCCTAATTATAAATTCTAGTCAATGGCTGCCGGCCTAGCGCATGCACATCTCCACTTGTTT
AATTTCAGCCTAGCTCTCGCTTGTTCCGCTTCCTCCATCTTGCGCAGGAGCAGATCGAGATCAACCTCTTTTCTACTCGT
TCTCCGTGATTTTACCTACTTGCTTGGTGCCATATATAGCCTGGTTTCTCTAGTATCTCCTCTATTCTCTAGCTTCTCCC
CGAGCTCATGACATAATCGGATCGAGGCAAGTCACCTTTTCGTGGAAGTTCATAAAAGACGCAAATATTGTGGAAGGAAC
TAATATCAAAAATTAGAAGGGGTGAGACTTCGTACCCAAG