miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005218
Located between position 24481931 and 24482076 on chromosome 02 strand -
mature miRNAs for MI0005218:
         osa-miR807b (MIMAT0004034): CGTCATCTCACAGGTGAATCC

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
TGACTATGACGCCGTCCTCGACCGCCTGGCGGGCCTGCGATCCCAGGGGCTCACAGGGGCCATGGTGTACGGCGACTACC
TCCGTCGCCGGATTGCGCCGCTCCAACGGCGCGCCCGGGGCGCCTGGGAGTACACCGGGTCCGAAGACTACATGCGGACC
CACCAGGGAGTCAGATGGGATTGGGCTCCCGAGGACTTCAAGATCGTGGTCCAAAGGGTGCTGAATCTCAGCTCCGTGGA
GGCGTCTCTCATCCCTCAAGGAATCCTCCCCCTCTGCAGCGATCCCGACCGCGCCTCCATTCTGACCATTATGATGGGGG
TCGGGGCCTCAGAGGAGGAAACTCCTAAGGGCCACGACGGCGCGGGCGAGAGCCGCCGGGGGGAACAATCTACCCCAGGA
GGGGGTCGTGCTTCTGGGCCCCGCGTCGGGGGCTCGGGGAGCAGCCGCCCTGCCGACGCCCAGGGGAAGAGGAAGCTGGG
AGGAACACCTCCCCCATCTCCTCCCCGAGGGGGCGGGGCGGTGCGTGCCAGCAGTCGGCACCCGGAGGGGGCCGCGCCGA
CATCGCAGCCCGAGGGGGAGCGCAAGAAGAAGCGGCTCCGCAAGATGGGGGAGACGGAACCATCCTGGGGAAACCTGATT
TCCCCTCCAAGGTGGTCATTTAACCGACCCCCTCGCAGGTTCGTCCCACTCTCTTTGCGACCGTCTTTCTTTTATCCCAA
AAGCAAGTTTTCTCTTACCCATCTTGTTTGTCTTCTGGTTTTTTCTTTTGCTTCAGCGATGTCCCGTCACGTTCCTCCCG
CCATCCCAAGTCCGGCCAATCCGAGGCCGAAGATCCGGCGGCCGCAGAGGAACGGAGGCGAGAATCTGACCGGCGAGAGG
CCGCAGATCGCCTTCGGGAAGCTGAAGAGGCCGCCCGGGAGGCCGCTCGGGCTCGCCATGCAGAGGATACCGCTCGGGAG
GAGGTCGCCCGGGCTCGCCAAGCCGAAGAAGCTGCTAAGGAGGAGGCCGCCCGGGCTCGTCAGGCTGAGGCGATGGCGTC
TTCCGAGGCAGCTCACGACAAAGCTGCTGGCGCGTCGCTTGGGCCTACTCCCTCGGGCGACGCTCAGGCGACAGCCTCCG
GGGCGGCTCGCGACGAGGCTGCGGGCGGATCGCCTGGGCCCACTTCCCCAGGCGACGTCCAGGACCAATCGGGTCCGGGG
GACATCCCCGAGCCCAGTGCGTCCTCCGGCGGGCCGAGCCGCGTCGCATTCTCTCCAAGGCGGCTATTCTCCTCGTCTTC
TGTCGCCCCGCTGAGCGCCGAGCCCCTTCTGCAGGCCTTGGCCGCCGCAAACACCGCGGTGCTAGATGGGTTCAGCGCCC
AAGTGGAGGCCCTGCGAGCGGAACGAGCGGAGCTCGAGGCCGCATGGGCGCGTGTCGAGGAGGGGCGGCGCTCGGTGGAT
GTCATGGTGGAGGTGGGCCGCAAGGCTCACCGCCGTCACGTCTCGGAGCTTGAAGCCCGCAAAGCGGCGCTGGCAGAGAT
CGCCCGAGAGGTGGAGGAGGAGCGGGAGGCCGCCCTCATTGCCACCACCGCGATGATCGAGGCGCAGGACACCCTCCGCC
TTCAACACGGGAGCTGGGAGGCGGAGCTAAAGAAAAAGCTCGACGCCGCCCAAGGGGTCCTTGACACCGCCGCTGCCCGA
GAGCGGCGGGCAACGGAGATCGAAGCGGCGTCCCGGCGGCGCGAGGAGGCCCTTGAGGCCCGTGCTATGGCATTGGAGGA
ACACGCCGGCGCCGTGGAGAGGGGCTTGGCGGACCGCGAGGCCGCCGCCGCTATCCGGGAGACAACGCTGGCGGTGCACG
AGGCCGCCTGCGCCGAAGAGGAGTCCGCGCTCCGCCTCCGCGAGGACGCACTCGCTGAGCGGGAGCGAGCTCTCGAAGAG
GCCGAGGCCGCGGCGCAACGGTTGGCGGATAGCCTTTTCCTCCGTGAGGCAGCGCTGGCGGAGCAGGCACGCCGCAATTT
GGAATCCGTCCGCGCCGAGAGAGCCGCACTGGAGCAGCGGGCTGCCGACCTCGAGGTGCGGGAAAAGGAGCTGGACGCGA
GGGCGCGTATCAGCGGGGCGGCTGCGGGCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACTCACCGTCGCCGAC
ATGCAGTGCGCGCTAGACTCATCCGCCGGGGAAGCCGAGGCCCTCCGCTTGGCGGGCGAAATAGGGCCCGGCATGCTTTG
GGATGCGGTCTCCCGCCTGGATCGCGCCGGTCGGCAAGCGGGCCTCTGGAAAGGCCAGTCAATGACACACCCCACCAACC
TGGAAGGCCTCGCTCCGCACCTCACGAAGATGGCCTGGGCTCTCCAACAACTCCCCGAGGAGCTCGAGAAGACCATCAAG
TCATCCTCGAGGGACCTCGCCCAAGGAGCGGTTGAACTCGTACTAGCGAGTTACCAGGCCAGGGACCCCAACTTCTCTCC
ATGGATGGCGCTGGAAGAGTTCCCTCCCGGGACCGAGGACGACGCGCGCGCGCGGGTCCGGGATGCCGCCGACCACATCG
TCCACAGTTTCGAGGGGTCGGCCCCTCGGCTCGCGTTCGCCCCCAACTCCGACGAGGAGGGCGACGCCAGCGGTGCAGAC
GACCGTGACGACGAGGCCGGCGACCCGGGCGCATCGGACTGAGCCCCCAGGCCCCCGCCAGACTCCAGTTTTTTTTTTTT
TTTTTTAAGGCCTTCATGCCTCTTTTTTGTATAGACCAACTTAATCTGCAATCAAAAATGATGAAAAAATTCGTGTCAAT
TTTATTTTGCTATGCGTATGAGATGAGGATGATCTGTGCCGTGGTCCTCTTTTGTGTCTTAGCTTGATTTAAGGGCTCGT
GCCCAAGTCCCAGTCCTCTAATGGCTCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCGAGGCTGGCCAGGCCGGG
AATGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGT